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PLM4_65_b1_redo_sep16_scaffold_4731

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4731_1
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(3..2075)
DNA (2073bp) protein (691aa)
PAS domain S-box Tax=Oscillatoria acuminata PCC 6304 RepID=K9TRQ5_9CYAN
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AFY85235.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
PLM4_65_b1_redo_sep16_scaffold_4731_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2284..3270)
DNA (987bp) protein (329aa)
gpsA1; glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_b1_redo_sep16_scaffold_4731_3
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(3267..3863)
DNA (597bp) protein (199aa)
Glycerol-3-phosphate acyltransferase Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1X6E1_ANEAE
plsY; hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_4731_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(3860..4450)
DNA (591bp) protein (197aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
2''-5'' RNA ligase Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GM33_9DELT
2'-5' RNA ligase
PLM4_65_b1_redo_sep16_scaffold_4731_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(4447..5706)
DNA (1260bp) protein (420aa)
competence/damage-inducible protein CinA C-terminal domain-containing protein; K03742 competence/damage-inducible protein CinA bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
competence damage-inducible protein A
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM4_65_b1_redo_sep16_scaffold_4731_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5703..7649)
DNA (1947bp) protein (649aa)
ATPase componens of ABC transporters with duplicated ATPase domains Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFY6_CHLTF
ATPase component of ABC transporters with duplicated ATPase domain {ECO:0000313|EMBL:CDM65004.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ABC transporter ATPase
PLM4_65_b1_redo_sep16_scaffold_4731_7
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7820..9124)
DNA (1305bp) protein (435aa)
Pyrimidine-nucleoside phosphorylase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCR6_ANASK
pyrimidine-nucleoside phosphorylase
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:ACG71890.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
PLM4_65_b1_redo_sep16_scaffold_4731_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(9121..10518)
DNA (1398bp) protein (466aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.31 {ECO:0000256|HAMAP-Rule:MF_01281};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJH0_CHLTF
cytosine deaminase
PLM4_65_b1_redo_sep16_scaffold_4731_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(10551..10943)
DNA (393bp) protein (131aa)
cytidine deaminase (EC:3.5.4.5)
cytidine deaminase (EC:3.5.4.5); K01489 cytidine deaminase [EC:3.5.4.5] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_4731_10
Bacillus sp. TH008, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10940..11791)
DNA (852bp) protein (284aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. TH008.;"
Purine nucleoside phosphorylase Tax=Bacillus cereus RepID=C2ZTW1_BACCE
purine nucleoside phosphorylase I
PLM4_65_b1_redo_sep16_scaffold_4731_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(11788..13032)
DNA (1245bp) protein (415aa)
nucleoside transporter NupC Tax=Xanthomonas sacchari RepID=UPI000262B436
nucleoside transporter
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_4731_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(13047..14204)
DNA (1158bp) protein (386aa)
Glycosyl transferase family 2 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5H3_9CHLR
Glycosyl transferase family 2 {ECO:0000313|EMBL:EFH81753.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
glycosyl transferase
PLM4_65_b1_redo_sep16_scaffold_4731_13
unknown

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comp(14304..14459)
DNA (156bp) protein (52aa)
phosphopentomutase (EC:5.4.2.7)
Displaying 13 items

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