name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM4_65_b1_redo_sep16_scaffold_1157_1
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria
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Not on your lists |
comp(3..956)
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Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Chaperone protein DnaJ bin=GWC2_Nitrospirae-rel_56_14 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
chaperone protein DnaJ
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PLM4_65_b1_redo_sep16_scaffold_1157_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
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Not on your lists |
1066..1539
|
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
AsnC family transcriptional regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
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PLM4_65_b1_redo_sep16_scaffold_1157_3
unknown
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Not on your lists |
comp(1803..2390)
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This feature has no annotations |
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PLM4_65_b1_redo_sep16_scaffold_1157_4
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria
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Not on your lists |
2462..3316
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phosphoribosyltransferase bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
amidophosphoribosyltransferase
Tax=RBG_16_Aminicenantes_63_16_curated
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PLM4_65_b1_redo_sep16_scaffold_1157_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria
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Not on your lists |
3313..4212
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L-proline dehydrogenase (EC:1.5.99.8)
L-proline dehydrogenase {ECO:0000313|EMBL:ABG05833.1}; EC=1.5.99.8 {ECO:0000313|EMBL:ABG05833.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
L-proline dehydrogenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARZ5_RUBXD
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PLM4_65_b1_redo_sep16_scaffold_1157_6
unknown
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Not on your lists |
4339..6216
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This feature has no annotations |
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PLM4_65_b1_redo_sep16_scaffold_1157_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria
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Not on your lists |
6418..9201
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multi-sensor signal transduction histidine kinase bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
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PLM4_65_b1_redo_sep16_scaffold_1157_8
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria
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Not on your lists |
9198..10574
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Uncharacterized protein {ECO:0000313|EMBL:KDA53114.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
sigma-54 dependent DNA-binding response regulator bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Fis family transcriptional regulator
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PLM4_65_b1_redo_sep16_scaffold_1157_9
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria
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Not on your lists |
10640..13435
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Peptidase M14 carboxypeptidase A bin=GWA2_Ignavibacteriae_54_16_partial species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
peptidase M14, carboxypeptidase A
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
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PLM4_65_b1_redo_sep16_scaffold_1157_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria
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Not on your lists |
comp(13282..14646)
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S-adenosylhomocysteine deaminase Tax=Cystobacter fuscus DSM 2262 RepID=S9PJA2_9DELT
amidohydrolase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
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PLM4_65_b1_redo_sep16_scaffold_1157_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
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Not on your lists |
comp(14657..16321)
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serine phosphatase RsbU bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
protein serine/threonine phosphatase with GAF(s) sensor(s)
Tax=RBG_16_Acidobacteria_70_10_curated
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PLM4_65_b1_redo_sep16_scaffold_1157_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
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Not on your lists |
16472..16702
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50S ribosomal protein L31 bin=GWF2_Lentisphaerae_50_93 species=Eubacterium limosum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
50S ribosomal protein L31
Tax=RBG_16_Acidobacteria_70_10_curated
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PLM4_65_b1_redo_sep16_scaffold_1157_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria
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Not on your lists |
16819..17898
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Peptide chain release factor 1 Tax=Koribacter versatilis (strain Ellin345) RepID=RF1_KORVE
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
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PLM4_65_b1_redo_sep16_scaffold_1157_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
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Not on your lists |
17895..18737
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Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Release factor glutamine methyltransferase Tax=delta proteobacterium MLMS-1 RepID=Q1NUK1_9DELT
HemK family modification methylase
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PLM4_65_b1_redo_sep16_scaffold_1157_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
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Not on your lists |
18743..20002
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UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371BBDF
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
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PLM4_65_b1_redo_sep16_scaffold_1157_16
CG_Elusi_04, Elusimicrobia, Bacteria
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Not on your lists |
19999..20337
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Histidine triad (HIT) protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3G8_GEODF
histidine triad (HIT) protein
Tax=CG_Elusi_04
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PLM4_65_b1_redo_sep16_scaffold_1157_17
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
20386..20586
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Putative uncharacterized protein Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=E2Q3Y6_STRC2
Putative uncharacterized protein {ECO:0000313|EMBL:EFG08924.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
hypothetical protein
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PLM4_65_b1_redo_sep16_scaffold_1157_18
RBG_13_Aminicenantes_64_14_curated, Aminicenantes, Bacteria
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Not on your lists |
comp(20602..21339)
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hypothetical protein bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_13_Aminicenantes_64_14_curated
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PLM4_65_b1_redo_sep16_scaffold_1157_19
unknown
|
Not on your lists |
comp(21344..21592)
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This feature has no annotations |
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PLM4_65_b1_redo_sep16_scaffold_1157_20
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
21624..22289
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Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Uroporphyrin-III C/tetrapyrrole (Corrin/porphyrin) methyltransferase Tax=Azospirillum sp. (strain B510) RepID=D3NYG5_AZOS1
uroporphyrin-III C/tetrapyrrole methyltransferase
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PLM4_65_b1_redo_sep16_scaffold_1157_21
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria
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Not on your lists |
22286..23281
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drrA; ABC transporter ATPase bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
ABC-type uncharacterized transport system, ATPase component
Tax=RIFOXYC12_FULL_TA06_54_24_curated
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PLM4_65_b1_redo_sep16_scaffold_1157_22
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria
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Not on your lists |
comp(23313..25355)
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3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
phospho-2-dehydro-3-deoxyheptonate aldolase
Tax=BJP_IG2102_Ignavibacteriales_35_8
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PLM4_65_b1_redo_sep16_scaffold_1157_23
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria
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Not on your lists |
25714..27387
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id=4424740 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RBG_13_Nitrospirae_43_8_curated
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PLM4_65_b1_redo_sep16_scaffold_1157_24
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria
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Not on your lists |
27384..28190
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daunorubicin ABC transporter permease Tax=Paenibacillus ginsengihumi RepID=UPI0003762165
ABC transporter permease
Tax=RIFOXYC12_FULL_TA06_54_24_curated
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PLM4_65_b1_redo_sep16_scaffold_1157_25
Bacillus mycoides, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
28190..29026
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ABC transporter permease protein Tax=Bacillus mycoides Rock1-4 RepID=C3AH68_BACMY
ABC transporter permease protein {ECO:0000313|EMBL:EEM07013.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus mycoides Rock1-4.;"
ABC-2 transporter family protein
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PLM4_65_b1_redo_sep16_scaffold_1157_26
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria
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Not on your lists |
comp(29100..32534)
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Abortive infection protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023Y2_SOLUE
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ABJ83694.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
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PLM4_65_b1_redo_sep16_scaffold_1157_27
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria
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Not on your lists |
comp(32569..33333)
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hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
putative oxidoreductase
Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
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PLM4_65_b1_redo_sep16_scaffold_1157_28
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria
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Not on your lists |
comp(33353..34705)
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DNA polymerase III, delta subunit Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZS13_OPITP
hypothetical protein
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ACB74689.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
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PLM4_65_b1_redo_sep16_scaffold_1157_29 |
Not on your lists |
comp(34777..35166)
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hypothetical protein Tax=unclassified Aminicenantes RepID=UPI0003785D12
Uncharacterized protein {ECO:0000313|EMBL:KKM94306.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TraR/DksA family transcriptional regulator
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PLM4_65_b1_redo_sep16_scaffold_1157_30
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(35280..36212)
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Sigma-54 dependent DNA-binding response regulator bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
two component, sigma54 specific, Fis family transcriptional regulator
Tax=GWC2_Rokubacteria_70_16_curated
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