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PLM4_65_b1_redo_sep16_scaffold_1853

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1853_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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3..1022
DNA (1020bp) protein (340aa)
Serine/threonine protein kinase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIA8_KORVE
serine/threonine protein kinase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_1853_2
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1027..1338
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XBV9_9BACT
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_65_b1_redo_sep16_scaffold_1853_trna_1
unknown

Not on your lists

1369..1461
DNA (93bp)
transferRNA Ser
PLM4_65_b1_redo_sep16_scaffold_1853_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1690..2322
DNA (633bp) protein (211aa)
RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin5_DeltaP species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin5_DeltaP organism_group=Deltaproteobacteria
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM4_65_b1_redo_sep16_scaffold_1853_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2319..2567
DNA (249bp) protein (83aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_1853_5
unknown

Not on your lists

2564..2776
DNA (213bp) protein (71aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1853_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

2974..4638
DNA (1665bp) protein (555aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:CBE70015.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBE70015.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
DNA polymerase III, subunits gamma and tau Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLV8_9BACT
PLM4_65_b1_redo_sep16_scaffold_1853_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

4651..4944
DNA (294bp) protein (98aa)
hypothetical protein; K09747 hypothetical protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_65_b1_redo_sep16_scaffold_1853_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4966..5556
DNA (591bp) protein (197aa)
recombinase RecR Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C3A75
recR; recombination protein RecR
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_b1_redo_sep16_scaffold_1853_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5585..6082
DNA (498bp) protein (166aa)
Roadblock/LC7 family protein Tax=Holophaga foetida DSM 6591 RepID=H1P039_9BACT
Roadblock/LC7 domain-containing protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1853_10
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

6128..6751
DNA (624bp) protein (208aa)
Putative GTPase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI80_CHLTF
Gliding-motility protein MglA {ECO:0000313|EMBL:KDA54983.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
putative GTPase
PLM4_65_b1_redo_sep16_scaffold_1853_11
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(6844..7275)
DNA (432bp) protein (144aa)
DoxX family protein Tax=Holophaga foetida DSM 6591 RepID=H1P0V1_9BACT
DoxX family protein
Tax=BJP_IG2158_Zixibacteria_48_33
PLM4_65_b1_redo_sep16_scaffold_1853_12
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(7317..7916)
DNA (600bp) protein (200aa)
Rhodanese domain protein Tax=Holophaga foetida DSM 6591 RepID=H1P0V0_9BACT
rhodanese domain-containing protein
Tax=GWF2_Lentisphaerae_57_35_curated
PLM4_65_b1_redo_sep16_scaffold_1853_13
unknown

Not on your lists

comp(7941..8264)
DNA (324bp) protein (108aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1853_14
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(8288..8836)
DNA (549bp) protein (183aa)
hypothetical protein Tax=Desulfobacter curvatus RepID=UPI00037145C7
metal dependent phosphohydrolase
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
PLM4_65_b1_redo_sep16_scaffold_1853_15
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8878..9357)
DNA (480bp) protein (160aa)
PadR family transcriptional regulator Tax=Paenibacillus alvei TS-15 RepID=S9TTZ5_PAEAL
PadR family transcriptional regulator {ECO:0000313|EMBL:EPY05776.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei TS-15.;"
PadR family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_1853_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

9918..10748
DNA (831bp) protein (277aa)
Putative uncharacterized protein Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8P7_AMMDK
protein of unknown function DUF178
Tax=RBG_16_Nitrospirae_64_22_curated
PLM4_65_b1_redo_sep16_scaffold_1853_17
unknown

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10815..11378
DNA (564bp) protein (188aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1853_18
unknown

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comp(11439..11936)
DNA (498bp) protein (166aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1853_19

Not on your lists

comp(11933..12781)
DNA (849bp) protein (283aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ESS06217.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ESS06217.1};; species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase Tax=uncultured archaeon A07HB70 RepID=V4Y5C2_9ARCH
PLM4_65_b1_redo_sep16_scaffold_1853_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(13060..13911)
DNA (852bp) protein (284aa)
amidohydrolase 2
amidohydrolase; K07045 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_1853_21
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13939..14736)
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P7K7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43353.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM4_65_b1_redo_sep16_scaffold_1853_22
unknown

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comp(14726..15610)
DNA (885bp) protein (295aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1853_23
RLO_WOR_2_51_8, WOR-2, Bacteria

Not on your lists

comp(15671..16981)
DNA (1311bp) protein (437aa)
Major facilitator superfamily MFS_1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QPG0_9CYAN
major facilitator superfamily MFS_1
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_8_curated
PLM4_65_b1_redo_sep16_scaffold_1853_24
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(16978..18381)
DNA (1404bp) protein (468aa)
mtp:Mthe_0367 Na+/solute symporter bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Na+/solute symporter
Tax=RBG_13_Chloroflexi_51_36_curated
PLM4_65_b1_redo_sep16_scaffold_1853_25
Leptospira interrogans, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18424..19602)
DNA (1179bp) protein (393aa)
Amidohydrolase Tax=Leptospira alstoni RepID=M6D3Q1_9LEPT
Amidohydrolase {ECO:0000313|EMBL:EMO28972.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira interrogans serovar Bataviae str. HAI135.;"
amaA; N-acyl-L-amino acid amidohydrolase
PLM4_65_b1_redo_sep16_scaffold_1853_26
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19677..20297
DNA (621bp) protein (207aa)
O-methyltransferase, family 3 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL13_KORVE
O-methyltransferase
O-methyltransferase, family 3 {ECO:0000313|EMBL:ABF42437.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_65_b1_redo_sep16_scaffold_1853_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20307..21464
DNA (1158bp) protein (386aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_b1_redo_sep16_scaffold_1853_28
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(21486..22208)
DNA (723bp) protein (241aa)
UPF0173 metal-dependent hydrolase Tter_0760 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFH1_THET1
beta-lactamase
UPF0173 metal-dependent hydrolase Tter_0760 {ECO:0000256|HAMAP-Rule:MF_00457}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM4_65_b1_redo_sep16_scaffold_1853_29
Bacillus sp. OxB-1, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22211..22708)
DNA (498bp) protein (166aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00037D8E06
gaf sensor protein
Gaf sensor protein {ECO:0000313|EMBL:BAQ11766.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. (strain OxB-1).;"
Displaying items 1-30 of 31 in total

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