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PLM4_65_b1_redo_sep16_scaffold_1994

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1994_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..520
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J6UI12_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW13701.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
PLM4_65_b1_redo_sep16_scaffold_1994_2
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

525..2192
DNA (1668bp) protein (556aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase Tax=Thiorhodovibrio sp. 970 RepID=H8Z2P7_9GAMM
5'-nucleotidase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM4_65_b1_redo_sep16_scaffold_1994_3
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2223..2954)
DNA (732bp) protein (244aa)
Short-chain dehydrogenase/reductase SDR Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VLQ4_RHOPX
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM4_65_b1_redo_sep16_scaffold_1994_4
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3263..4360
DNA (1098bp) protein (366aa)
chromate transporter Tax=Pseudomonas putida RepID=UPI00036CC4D3
chromate transporter
Chromate transporter, chromate ion transporter (CHR) family {ECO:0000313|EMBL:ABK15795.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
PLM4_65_b1_redo_sep16_scaffold_1994_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4377..5240
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y0A8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36348.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM4_65_b1_redo_sep16_scaffold_1994_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5267..6712)
DNA (1446bp) protein (482aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:CDM66539.1}; EC=1.1.1.42 {ECO:0000313|EMBL:CDM66539.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375027A
isocitrate dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_1994_7
unknown

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6822..7193
DNA (372bp) protein (124aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1994_8
unknown

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7336..7683
DNA (348bp) protein (116aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1994_9
unknown

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7748..8134
DNA (387bp) protein (129aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1994_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8068..9096)
DNA (1029bp) protein (343aa)
glk; glucokinase (Glucose kinase) (EC:2.7.1.2) bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
glucokinase
Tax=RBG_16_Gamma2_65_34_curated
PLM4_65_b1_redo_sep16_scaffold_1994_11
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9416..10732)
DNA (1317bp) protein (439aa)
Phospholipase D/Transphosphatidylase Tax=Chthoniobacter flavus Ellin428 RepID=B4D4N7_9BACT
phospholipase D/transphosphatidylase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM4_65_b1_redo_sep16_scaffold_1994_12
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10829..12106
DNA (1278bp) protein (426aa)
cardiolipin synthetase Tax=Xanthomonas arboricola RepID=UPI0002E5A11C
cls; cardiolipin synthetase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM4_65_b1_redo_sep16_scaffold_1994_13
unknown

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comp(12111..12515)
DNA (405bp) protein (135aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1994_14
Prevotella sp. CAG:485, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12577..13422
DNA (846bp) protein (282aa)
Uncharacterized protein Tax=Prevotella sp. CAG:485 RepID=R7EXV4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE07158.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:485.;"
Exonuclease RNase T and DNA polymerase III
PLM4_65_b1_redo_sep16_scaffold_1994_15
unknown

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comp(13595..14146)
DNA (552bp) protein (184aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1994_16
unknown

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comp(14143..14823)
DNA (681bp) protein (227aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1994_17
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14804..15826)
DNA (1023bp) protein (341aa)
Helix-turn-helix, type 11 domain protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWY1_OPITP
helix-turn-helix, type 11 domain-containing protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
PLM4_65_b1_redo_sep16_scaffold_1994_18
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(16226..17200)
DNA (975bp) protein (325aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54849.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1994_19
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(17374..19254)
DNA (1881bp) protein (627aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
Methylenetetrahydrofolate reductase Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L045_THERP
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase
PLM4_65_b1_redo_sep16_scaffold_1994_20
unknown

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19656..20054
DNA (399bp) protein (133aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1994_21
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

20066..21352
DNA (1287bp) protein (429aa)
Phosphoribosylamine--glycine ligase Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T214_THEA1
phosphoribosylamine/glycine ligase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_1994_22
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

21799..22419
DNA (621bp) protein (207aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
Displaying 22 items

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