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PLM4_65_b1_redo_sep16_scaffold_2381

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2381_1
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1460)
DNA (1458bp) protein (486aa)
hypothetical protein Tax=Anabaena sp. PCC 7108 RepID=UPI0003473F06
Uncharacterized protein {ECO:0000313|EMBL:EDN69154.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
PEP-CTERM putative exosortase interaction domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_2381_2
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

1494..3749
DNA (2256bp) protein (752aa)
protein kinase domain-containing protein (EC:2.7.11.1)
Protein kinase domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LID8_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:KDA53165.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
PLM4_65_b1_redo_sep16_scaffold_2381_3
unknown

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4435..4899
DNA (465bp) protein (155aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2381_4
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4916..6460)
DNA (1545bp) protein (515aa)
hypothetical protein Tax=Stenotrophomonas maltophilia RepID=UPI0003612DAA
alpha/beta fold family hydrolase
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:AGC44052.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM4_65_b1_redo_sep16_scaffold_2381_5
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

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6685..7737
DNA (1053bp) protein (351aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_13_Caldithrix_44_9_curated
PLM4_65_b1_redo_sep16_scaffold_2381_6
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(7756..9621)
DNA (1866bp) protein (622aa)
UPI0003D67EEE related cluster Tax=unknown RepID=UPI0003D67EEE
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_2381_7
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9669..10655
DNA (987bp) protein (329aa)
Pyridine nucleotide-disulfide oxidoreductase family Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6I5_ACIC5
pyridine nucleotide-disulfide oxidoreductase family
Pyridine nucleotide-disulfide oxidoreductase family {ECO:0000313|EMBL:ACO34561.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
PLM4_65_b1_redo_sep16_scaffold_2381_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10797..11399
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6Q4X4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ETX00910.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
ECF subfamily RNA polymerase sigma-24 factor
PLM4_65_b1_redo_sep16_scaffold_2381_9
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11396..12208
DNA (813bp) protein (271aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00036CA58A
methylated-DNA-(protein)-cysteine S-methyltransferase
Tax=RBG_16_Actinobacteria_70_17_curated
PLM4_65_b1_redo_sep16_scaffold_2381_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12252..12497
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_2381_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12494..12883
DNA (390bp) protein (130aa)
Death on curing protein, Doc toxin Tax=uncultured bacterium A1Q1_fos_493 RepID=L7W1K3_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_2381_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12885..13331
DNA (447bp) protein (149aa)
Predicted thioesterase {ECO:0000313|EMBL:CDM64530.1}; EC=3.1.2.- {ECO:0000313|EMBL:CDM64530.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein Tax=Zavarzinella formosa RepID=UPI00030206E4
ybgC; acyl-coenzyme A thioester hydrolase
PLM4_65_b1_redo_sep16_scaffold_2381_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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13520..16000
DNA (2481bp) protein (827aa)
Lon protease Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKJ4_SINAD
ATP-dependent protease La
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_2381_14
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16088..16903)
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E8L1_BRASB
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM4_65_b1_redo_sep16_scaffold_2381_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

16981..19542
DNA (2562bp) protein (854aa)
Serine/threonine protein kinase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIA8_KORVE
serine/threonine protein kinase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2381_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19944..20219)
DNA (276bp) protein (92aa)
Prevent-host-death family protein bin=GWC2_Methylomirabilis_70_24 species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
prevent-host-death family protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_2381_17
unknown

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comp(20274..20366)
DNA (93bp) protein (31aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2381_18
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20488..21504
DNA (1017bp) protein (339aa)
DNA polymerase bacteriophage-type Tax=Amycolatopsis orientalis HCCB10007 RepID=R4ST09_AMYOR
dpo; DNA polymerase bacteriophage-type
DNA polymerase bacteriophage-type {ECO:0000313|EMBL:AGM05725.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
PLM4_65_b1_redo_sep16_scaffold_2381_19
unknown

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comp(21440..21643)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2381_20
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

21852..22307
DNA (456bp) protein (152aa)
Transcriptional repressor, CopY family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X41_SOLUE
CopY family transcriptional regulator
Tax=RBG_16_Aminicenantes_63_16_curated
PLM4_65_b1_redo_sep16_scaffold_2381_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22309..24795
DNA (2487bp) protein (829aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A717_GEMAT
peptidase M56 BlaR1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AHG88998.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_2381_22
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

24888..25748
DNA (861bp) protein (287aa)
3-isopropylmalate dehydratase large subunit Tax=Aquifex aeolicus (strain VF5) RepID=LEUC_AQUAE bin=16ft_combo_ws3_JS1 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
3-isopropylmalate dehydratase, small subunit
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 22 items

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