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PLM4_65_b1_redo_sep16_scaffold_2427

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2427_1
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..979)
DNA (978bp) protein (326aa)
Fibronectin type III domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XEJ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EZH74616.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
fibronectin type III domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_2427_2
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

1461..2024
DNA (564bp) protein (188aa)
blue (type 1) copper domain protein bin=GWC2_Chloroflexi_73_18 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Copper binding protein, plastocyanin/azurin family
Tax=GWC2_RIF_CHLX_73_18_curated
PLM4_65_b1_redo_sep16_scaffold_2427_3
GWA2_OP3_50_21_curated, Omnitrophica, Bacteria

Not on your lists

2126..5143
DNA (3018bp) protein (1006aa)
Sensor diguanylate cyclase/phosphodiesterase, PAS, PAS and PAS domain-containing Tax=Geobacter metallireducens RepID=Q39R25_GEOMG
hypothetical protein
Tax=GWA2_OP3_50_21_curated
PLM4_65_b1_redo_sep16_scaffold_2427_4
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(5140..5619)
DNA (480bp) protein (160aa)
hisG3; ATP phosphoribosyltransferase (EC:2.4.2.17)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036C2855
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_65_b1_redo_sep16_scaffold_2427_5
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

5654..6115
DNA (462bp) protein (154aa)
MOSC domain containing protein Tax=uncultured candidate division OP1 bacterium RepID=H5SFC5_9BACT
MOSC domain containing protein {ECO:0000313|EMBL:BAL58559.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
MOSC domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_2427_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6112..6600)
DNA (489bp) protein (163aa)
SsrA-binding protein Tax=Mobiluncus mulieris RepID=C2KNC7_9ACTO
SsrA-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_b1_redo_sep16_scaffold_2427_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

6830..7717
DNA (888bp) protein (296aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase bin=GWC2_Nitrospirae_57_13 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
PLM4_65_b1_redo_sep16_scaffold_2427_8
unknown

Not on your lists

7812..8378
DNA (567bp) protein (189aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2427_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

8375..10573
DNA (2199bp) protein (733aa)
multi-sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] bin=bin3_NC10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_2427_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

10570..11928
DNA (1359bp) protein (453aa)
Fis family transcriptional regulator
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_2427_11
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(11958..12857)
DNA (900bp) protein (300aa)
Glutamate formiminotransferase Tax=uncultured candidate division OP1 bacterium RepID=H5SFH1_9BACT
Glutamate formiminotransferase {ECO:0000313|EMBL:BAL60043.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
formiminotransferase-cyclodeaminase
PLM4_65_b1_redo_sep16_scaffold_2427_12
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

12958..14748
DNA (1791bp) protein (597aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53355.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
PLM4_65_b1_redo_sep16_scaffold_2427_13
unknown

Not on your lists

14745..15317
DNA (573bp) protein (191aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2427_14
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

15329..16969
DNA (1641bp) protein (547aa)
NAD+ synthase bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
NH(3)-dependent NAD(+) synthetase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM4_65_b1_redo_sep16_scaffold_2427_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16962..17687
DNA (726bp) protein (242aa)
Methionine biosynthesis protein MetW bin=GWF2_Methylomirabilis_70_14 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_65_b1_redo_sep16_scaffold_2427_16
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17684..18427
DNA (744bp) protein (248aa)
Glycosyl transferase, family 2 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ASH5_PELPD
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABL00296.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PLM4_65_b1_redo_sep16_scaffold_2427_17
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

comp(18463..19803)
DNA (1341bp) protein (447aa)
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
PLM4_65_b1_redo_sep16_scaffold_2427_18
unknown

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comp(19800..20198)
DNA (399bp) protein (133aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2427_19
unknown

Not on your lists

comp(20219..20341)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 19 items

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