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PLM4_65_b1_redo_sep16_scaffold_2537

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2537_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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56..862
DNA (807bp) protein (269aa)
Putative membrane-associated protein Tax=Herbaspirillum sp. YR522 RepID=J3HYT9_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_65_b1_redo_sep16_scaffold_2537_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1100..1867
DNA (768bp) protein (256aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HIE9_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS28495.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_b1_redo_sep16_scaffold_2537_3

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1941..2228
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL69203.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_b1_redo_sep16_scaffold_2537_4

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2221..2586
DNA (366bp) protein (122aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000377F92A
Uncharacterized protein {ECO:0000313|EMBL:KKL69202.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
growth inhibitor
PLM4_65_b1_redo_sep16_scaffold_2537_5
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(2630..4294)
DNA (1665bp) protein (555aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=PYRG_ACIC5
PLM4_65_b1_redo_sep16_scaffold_2537_6
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4291..5043)
DNA (753bp) protein (251aa)
3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase bin=GWC2_Deltaproteobacteria_66_88 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM4_65_b1_redo_sep16_scaffold_2537_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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5093..5707
DNA (615bp) protein (205aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53214.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
PLM4_65_b1_redo_sep16_scaffold_2537_8
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(5714..6091)
DNA (378bp) protein (126aa)
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM4_65_b1_redo_sep16_scaffold_2537_9
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(6309..7319)
DNA (1011bp) protein (337aa)
Octaprenyl diphosphate synthase Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EBB6_GEOBB
Uncharacterized protein {ECO:0000313|EMBL:KDA53215.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
ispB; octaprenyl diphosphate synthase
PLM4_65_b1_redo_sep16_scaffold_2537_10
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

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comp(7316..7813)
DNA (498bp) protein (166aa)
UPF0234 protein Cabther_A1309 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LES7_CHLTF
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
PLM4_65_b1_redo_sep16_scaffold_2537_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(8036..8725)
DNA (690bp) protein (230aa)
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
putative outer membrane lipoprotein carrier protein LolA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_2537_12
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8776..10368)
DNA (1593bp) protein (531aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH Tax=Thermobifida fusca RepID=Q47LR7_THEFY
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
PLM4_65_b1_redo_sep16_scaffold_2537_13
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10371..10619
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VKA5_9RHOB
SirA family protein {ECO:0000313|EMBL:BAQ69658.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidophilum (Rhodobacter sulfidophilus).;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2537_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(10616..13414)
DNA (2799bp) protein (933aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_2537_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(13455..14537)
DNA (1083bp) protein (361aa)
Protein RecA Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV37_KORVE
recA protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_65_b1_redo_sep16_scaffold_2537_16
RLO_RIF02_62_27, RIF2, Bacteria

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14663..15247
DNA (585bp) protein (195aa)
Phosphatidylglycerophosphatase A bin=GWC2_Methylomirabilis_70_24 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phosphatidylglycerophosphatase A
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM4_65_b1_redo_sep16_scaffold_2537_17
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15244..16140
DNA (897bp) protein (299aa)
UDP-N-acetylenolpyruvoylglucosamine reductase 2 {ECO:0000255|HAMAP-Rule:MF_00037}; EC=1.3.1.98 {ECO:0000255|HAMAP-Rule:MF_00037};; UDP-N-acetylmuramate dehydrogenase 2 {ECO:0000255|HAMAP-Rule:MF_00037}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
UDP-N-acetylenolpyruvoylglucosamine reductase 2 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=MURB2_SYMTH
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
PLM4_65_b1_redo_sep16_scaffold_2537_18
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16193..17188
DNA (996bp) protein (332aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:ADV28278.1}; EC=5.3.1.8 {ECO:0000313|EMBL:ADV28278.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WW70_PSEUU
PLM4_65_b1_redo_sep16_scaffold_2537_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

17185..18126
DNA (942bp) protein (314aa)
MoxR-like ATPase (EC:3.6.3.-)
MoxR-like ATPase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFK8_CHLTF
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_2537_20
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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18131..19117
DNA (987bp) protein (329aa)
hypothetical protein bin=bin7_NC10_sister species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_2537_21
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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19129..20745
DNA (1617bp) protein (539aa)
hypothetical protein bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
transglutaminase
Tax=RBG_13_Acidobacteria_68_16_curated
Displaying 21 items

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