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PLM4_65_b1_redo_sep16_scaffold_10004

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_10004_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2..574
DNA (573bp) protein (191aa)
Transporter, major facilitator family protein bin=GWF2_Methylomirabilis_70_14 species=Paenibacillus sp. HGF7 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arabinose efflux permease family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
PLM4_65_b1_redo_sep16_scaffold_10004_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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870..1661
DNA (792bp) protein (264aa)
Magnesium-dependent deoxyribonuclease, TatD family bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
magnesium-dependent deoxyribonuclease, TatD family
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_10004_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1732..2739)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_10004_4
CSP1_5_NC10, NC10, Bacteria

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2903..3802
DNA (900bp) protein (300aa)
putative small-conductance mechanosensitive ion channel; K03442 small conductance mechanosensitive channel bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
putative small-conductance mechanosensitive ion channel
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_10004_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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3967..5097
DNA (1131bp) protein (377aa)
Inner membrane transport protein YajR Tax=Pectobacterium sp. (strain SCC3193) RepID=K4FWQ2_PECSS
major facilitator superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_10004_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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5238..5570
DNA (333bp) protein (111aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_10004_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5647..6513)
DNA (867bp) protein (289aa)
Uncharacterized protein Tax=Halobiforma lacisalsi AJ5 RepID=M0LL17_9EURY
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_10004_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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6589..7650
DNA (1062bp) protein (354aa)
Putative A/G-specific adenine glycosylase yfhQ Tax=Nitrospina gracilis 3/211 RepID=M1YZF8_9BACT
A/G-specific adenine glycosylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_10004_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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7631..8392
DNA (762bp) protein (254aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
Monofunctional biosynthetic peptidoglycan transglycosylase bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_10004_10
unknown

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8592..8804
DNA (213bp) protein (71aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_10004_11
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8996..9526
DNA (531bp) protein (177aa)
thioredoxin Tax=Burkholderia sp. WSM4176 RepID=UPI00037100FB
Thioredoxin {ECO:0000313|EMBL:KJK24422.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
redoxin
PLM4_65_b1_redo_sep16_scaffold_10004_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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9582..9827
DNA (246bp) protein (82aa)
Oxidoreductase, molybdopterin binding Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PH6_SOLUE
sulfite oxidase subunit YedY
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 12 items

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