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PLM4_65_b1_redo_sep16_scaffold_3312

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3312_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(591..1316)
DNA (726bp) protein (242aa)
Putative sterol desaturase Tax=Candidatus Nitrospira defluvii RepID=B3U4Q9_9BACT
hypothetical protein
Putative sterol desaturase {ECO:0000313|EMBL:ACE75626.1}; Uncharacterized protein {ECO:0000313|EMBL:CBK41221.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM4_65_b1_redo_sep16_scaffold_3312_2
unknown

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comp(1336..1542)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3312_3
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(1542..1826)
DNA (285bp) protein (95aa)
Transposase, Y1_Tnp domain-containing bin=GWC2_Nitrospirae_57_13 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=GWC2_Nitrospirae_57_13_curated
PLM4_65_b1_redo_sep16_scaffold_3312_4
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2030..2524)
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ18243.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
PLM4_65_b1_redo_sep16_scaffold_3312_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2953..3246)
DNA (294bp) protein (98aa)
id=1985031 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_3312_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3262..4383)
DNA (1122bp) protein (374aa)
Chaperone protein DnaJ bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
DnaJ-class molecular chaperone with C-terminal Zn finger domain
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_3312_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4579..5001
DNA (423bp) protein (141aa)
Glutathione S-transferase Tax=Sorangium cellulosum So0157-2 RepID=S4Y0Y7_SORCE
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AGP38151.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM4_65_b1_redo_sep16_scaffold_3312_8
unknown

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comp(5466..5645)
DNA (180bp) protein (60aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3312_9
unknown

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5901..6173
DNA (273bp) protein (91aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3312_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6380..7489
DNA (1110bp) protein (370aa)
hypothetical protein Tax=Methylobacter marinus RepID=UPI00037AC153
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_b1_redo_sep16_scaffold_3312_11
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7812..8771
DNA (960bp) protein (320aa)
Putative uncharacterized protein Tax=Nitrosococcus oceani RepID=Q3J941_NITOC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI18955.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
PLM4_65_b1_redo_sep16_scaffold_3312_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9215..10114
DNA (900bp) protein (300aa)
CBS domain protein Tax=Selenomonas RepID=C9LXK8_SELS3
CBS domain containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_3312_13
unknown

Not on your lists

comp(10178..10372)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3312_14
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10799..11701
DNA (903bp) protein (301aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VQE2_9CYAN
phosphonate ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
PLM4_65_b1_redo_sep16_scaffold_3312_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11936..12946)
DNA (1011bp) protein (337aa)
Extracellular solute-binding protein family 1 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_3312_16
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13056..14099
DNA (1044bp) protein (348aa)
ornithine cyclodeaminase; K01750 ornithine cyclodeaminase [EC:4.3.1.12] bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
Ornithine cyclodeaminase (EC:4.3.1.12)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_3312_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

14716..15903
DNA (1188bp) protein (396aa)
BNR/Asp-box repeat protein bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
BNR/Asp-box repeat-containing protein
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_3312_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15900..16196
DNA (297bp) protein (99aa)
hypothetical protein bin=bin3_NC10 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_b1_redo_sep16_scaffold_3312_19
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16722..17081
DNA (360bp) protein (120aa)
RNA signal recognition particle 4.5S RNA Tax=Arenimonas oryziterrae RepID=UPI0003B32C57
RNA signal recognition particle 4.5S RNA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM4_65_b1_redo_sep16_scaffold_3312_20
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17205..17405
DNA (201bp) protein (67aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002DD7C77
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC48033.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
Displaying 20 items

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