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PLM4_65_b1_redo_sep16_scaffold_3325

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3325_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..944)
DNA (942bp) protein (314aa)
Amidohydrolase 2 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A126_STAND
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_3325_2
unknown

Not on your lists

comp(1036..1752)
DNA (717bp) protein (239aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3325_3
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1856..2509)
DNA (654bp) protein (218aa)
Phosphatase/phosphohexomutase Tax=uncultured bacterium RepID=K2A643_9BACT
HAD family hydrolase
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
PLM4_65_b1_redo_sep16_scaffold_3325_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2676..3194)
DNA (519bp) protein (173aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_3325_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3372..3833
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Paenibacillus mucilaginosus RepID=F8FIK6_PAEMK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_3325_6
unknown

Not on your lists

comp(3968..4294)
DNA (327bp) protein (109aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3325_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4565..5422)
DNA (858bp) protein (286aa)
Phosphogluconate dehydrogenase, NAD-binding bin=GWD2_Deltaproteobacteria_55_8 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phosphogluconate dehydrogenase, NAD-binding -like protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_3325_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5553..6656
DNA (1104bp) protein (368aa)
Ornithine cyclodeaminase 2 Tax=Marinobacter sp. BSs20148 RepID=M1FIC1_9ALTE
ocd2; Ornithine cyclodeaminase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_3325_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6751..7740
DNA (990bp) protein (330aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NMT1/THI5 like domain protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_3325_10
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7898..8554
DNA (657bp) protein (219aa)
Peroxidase Tax=Ralstonia pickettii DTP0602 RepID=U3R001_RALPI
peroxidase
Peroxidase {ECO:0000313|EMBL:AGW94806.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
PLM4_65_b1_redo_sep16_scaffold_3325_11
unknown

Not on your lists

9123..9710
DNA (588bp) protein (196aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3325_12
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(9828..10445)
DNA (618bp) protein (206aa)
5 nucleotidase, deoxy, cytosolic type C Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EC88_CHLL2
5' nucleotidase
5 nucleotidase, deoxy, cytosolic type C {ECO:0000313|EMBL:ACD90163.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium limicola (strain DSM 245 / NBRC 103803).;"
PLM4_65_b1_redo_sep16_scaffold_3325_13
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10563..11279)
DNA (717bp) protein (239aa)
Putative ABC-transporter Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P0M2_AROAE
ABC-transporter
Putative ABC-transporter {ECO:0000313|EMBL:CAI09142.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
PLM4_65_b1_redo_sep16_scaffold_3325_14
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11315..11551)
DNA (237bp) protein (79aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q472I1_CUPPJ
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_65_b1_redo_sep16_scaffold_3325_15
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11653..12033)
DNA (381bp) protein (127aa)
branched-chain amino acid ABC transporter substrate-binding protein Tax=Afipia birgiae RepID=UPI0002F1F0A3
ABC-transporter
Putativ ABC-transporter {ECO:0000313|EMBL:CAI09141.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
PLM4_65_b1_redo_sep16_scaffold_3325_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12030..12281)
DNA (252bp) protein (84aa)
Branched-chain amino acid transport system, permease component Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HZ95_BORPD
ABC-transporter
Tax=CG_Rhodocyc_01
PLM4_65_b1_redo_sep16_scaffold_3325_17
unknown

Not on your lists

12283..12942
DNA (660bp) protein (220aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3325_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13070..14260)
DNA (1191bp) protein (397aa)
Putative ABC transporter subunit Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P0M6_AROAE
branched-chain amino acid ABC transporter system, substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_65_b1_redo_sep16_scaffold_3325_19
Azoarcus evansii, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14355..14981)
DNA (627bp) protein (209aa)
4-hydroxybenzoate--CoA ligase Tax=Azoarcus toluclasticus RepID=UPI00037CDC5C
Benzoate-CoA ligase {ECO:0000313|EMBL:CAD21640.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus evansii.;"
bclA; benzoate-CoA ligase
PLM4_65_b1_redo_sep16_scaffold_3325_20
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15411..15989)
DNA (579bp) protein (193aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Tribolium castaneum genus=Tribolium taxon_order=Coleoptera taxon_class=Insecta phylum=Arthropoda tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_3325_21
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16043..16387)
DNA (345bp) protein (115aa)
hypothetical protein GobsU_20598 bin=GWD2_Deltaproteobacteria_55_8 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
OmpA/MotB domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_3325_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16794..17780
DNA (987bp) protein (329aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NMT1/THI5 like domain protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_3325_23
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17786..19180)
DNA (1395bp) protein (465aa)
Putative transposase Tax=Ralstonia syzygii R24 RepID=G3AAD4_9RALS
Transposase {ECO:0000313|EMBL:EWS65957.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
Transposase, IS4 family protein
Displaying 23 items

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