ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_16327

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_16327_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(409..1218)
DNA (810bp) protein (270aa)
Methylated-DNA--protein-cysteine methyltransferase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
methylated-DNA--protein-cysteine methyltransferase
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_b1_redo_sep16_scaffold_16327_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1218..1688)
DNA (471bp) protein (157aa)
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_b1_redo_sep16_scaffold_16327_3
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2081..2299)
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Herminiimonas arsenicoxydans RepID=A4G372_HERAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL60959.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
PLM4_65_b1_redo_sep16_scaffold_16327_4
unknown

Not on your lists

2820..3101
DNA (282bp) protein (94aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_16327_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3362..4471
DNA (1110bp) protein (370aa)
putative tRNA-dihydrouridine synthase (EC:1.-.-.-)
tRNA-dihydrouridine synthase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_16327_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4676..5113
DNA (438bp) protein (146aa)
hypothetical protein Tax=unclassified candidate division EM 19 RepID=UPI000375C6C8
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_16327_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5469..7247)
DNA (1779bp) protein (593aa)
hypothetical protein Tax=Methylocystis rosea RepID=UPI00036862B4
Von Willebrand factor type A (VWA) domain protein-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_16327_8
unknown

Not on your lists

comp(7477..7557)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 8 items

View Taxonomy