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PLM4_65_b1_redo_sep16_scaffold_5937

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5937_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1..192
DNA (192bp) protein (64aa)
Nuclear protein SET Tax=Ralstonia pickettii (strain 12D) RepID=C6BHC2_RALP1
SET domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_65_b1_redo_sep16_scaffold_5937_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

779..1927
DNA (1149bp) protein (383aa)
A rare lipoprotein A bin=GWD2_Deltaproteobacteria_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cell division protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5937_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2004..2966)
DNA (963bp) protein (321aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_CPR2_39_7 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
NMT1/THI5-like domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5937_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3164..4159
DNA (996bp) protein (332aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5937_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4467..5006)
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=haloarchaeon 3A1_DGR RepID=T0STT8_9EURY
carboxymuconolactone decarboxylase family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5937_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5128..5667)
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=haloarchaeon 3A1_DGR RepID=T0STT8_9EURY
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5937_7
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(5682..6602)
DNA (921bp) protein (307aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI0002D6B735
alpha/beta hydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_65_b1_redo_sep16_scaffold_5937_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6672..7736)
DNA (1065bp) protein (355aa)
Amidohydrolase family protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5937_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7893..8897
DNA (1005bp) protein (335aa)
Extracellular solute-binding protein family 1 bin=GWC2_Syntrophus__56_31 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
family 1 extracellular solute-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_5937_10
unknown

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comp(8938..9216)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5937_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9412..10851)
DNA (1440bp) protein (480aa)
UbiD-like subunit of potential (De) carboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD family decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5937_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10939..12420)
DNA (1482bp) protein (494aa)
pyruvate carboxylase (EC:6.4.1.1)
Oxaloacetate decarboxylase bin=GWD2_Deltaproteobacteria_55_8 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5937_13
unknown

Not on your lists

comp(12497..12847)
DNA (351bp) protein (117aa)

This feature has no annotations

Displaying 13 items

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