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PLM4_65_b1_redo_sep16_scaffold_4716

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4716_1
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..507)
DNA (507bp) protein (169aa)
hypothetical protein Tax=Methyloversatilis sp. NVD RepID=UPI000369B106
RES domain protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM4_65_b1_redo_sep16_scaffold_4716_2
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(513..932)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39V33_GEOMG
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM4_65_b1_redo_sep16_scaffold_4716_3
unknown

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comp(1097..1321)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4716_4
unknown

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1473..1793
DNA (321bp) protein (107aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4716_5
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1796..2419
DNA (624bp) protein (208aa)
hypothetical protein Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036066DB
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_62_13__curated
PLM4_65_b1_redo_sep16_scaffold_4716_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2440..3012
DNA (573bp) protein (191aa)
Transglycosylase SLT domain containing protein Tax=Gammaproteobacteria RepID=C4NV68_ECOLX
transglycosylase
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EFK00170.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
PLM4_65_b1_redo_sep16_scaffold_4716_7
unknown

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3056..3667
DNA (612bp) protein (204aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4716_8
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3664..4170
DNA (507bp) protein (169aa)
Flagellar transcriptional activator FlhC Tax=Thiocapsa marina 5811 RepID=F9UC06_9GAMM
Flagellar transcriptional activator FlhC {ECO:0000313|EMBL:EGV18474.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_4716_9
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4661..5335)
DNA (675bp) protein (225aa)
NERD domain protein Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SVR5_PLAL2
putative NERD domain protein
Putative NERD domain protein {ECO:0000313|EMBL:AJR06499.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaetbulicola Gung47.;"
PLM4_65_b1_redo_sep16_scaffold_4716_10
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(5427..6224)
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YS34_9CHLB
Uncharacterized protein {ECO:0000313|EMBL:EAT59176.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
competence protein-like
PLM4_65_b1_redo_sep16_scaffold_4716_11
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(6536..7027)
DNA (492bp) protein (164aa)
Putative uncharacterized protein Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3E193_METI4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD82889.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
PLM4_65_b1_redo_sep16_scaffold_4716_12
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7152..7805
DNA (654bp) protein (218aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI000317C715
Uncharacterized protein {ECO:0000313|EMBL:KIF80107.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_4716_13
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7822..9102)
DNA (1281bp) protein (427aa)
DNA repair protein Tax=Thauera sp. 28 RepID=N6ZIV1_9RHOO
UMUC domain-containing protein DNA-repair protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_65_b1_redo_sep16_scaffold_4716_14
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9102..9512)
DNA (411bp) protein (137aa)
Peptidase S24/S26A/S26B, conserved region Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SJZ2_GALCS
Peptidase S24/S26A/S26B, conserved region
Peptidase S24/S26A/S26B, conserved region {ECO:0000313|EMBL:ADL56404.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
PLM4_65_b1_redo_sep16_scaffold_4716_15
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(9809..10180)
DNA (372bp) protein (124aa)
Putative uncharacterized protein Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BD71_CHLPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL64348.1}; Flags: Precursor;; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain DSM 266).;"
PLM4_65_b1_redo_sep16_scaffold_4716_16
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10320..10505)
DNA (186bp) protein (62aa)
Putative uncharacterized protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z465_DESAT
Uncharacterized protein {ECO:0000313|EMBL:KFE29540.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_4716_17
Providencia alcalifaciens, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11058..11348
DNA (291bp) protein (97aa)
hypothetical protein Tax=Vibrio cholerae RepID=UPI0003622C54
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ACV96034.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia alcalifaciens Ban1.;"
PLM4_65_b1_redo_sep16_scaffold_4716_18
unknown

Not on your lists

comp(12266..12622)
DNA (357bp) protein (119aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4716_19

Not on your lists

12731..12937
DNA (207bp) protein (69aa)
UPI0003D1B90B related cluster Tax=unknown RepID=UPI0003D1B90B
Uncharacterized protein {ECO:0000313|EMBL:KKN68331.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_b1_redo_sep16_scaffold_4716_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13006..13197
DNA (192bp) protein (64aa)
hypothetical protein Tax=Janthinobacterium sp. CG3 RepID=UPI000379A819
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_4716_21
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13211..13402
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=Methylophaga lonarensis MPL RepID=M7NYK3_9GAMM
membrane protein
Membrane protein {ECO:0000313|EMBL:AJC16560.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
PLM4_65_b1_redo_sep16_scaffold_4716_22

Not on your lists

13490..13831
DNA (342bp) protein (114aa)
Putative integron gene cassette protein (Fragment) Tax=uncultured bacterium RepID=B0BHE4_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP48202.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM4_65_b1_redo_sep16_scaffold_4716_23
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14043..14486
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Comamonas testosteroni KF-1 RepID=B7WUH1_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EED65655.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
hypothetical protein
Displaying 23 items

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