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PLM4_65_b1_redo_sep16_scaffold_6469

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6469_1
uncultured gamma proteobacterium, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..582)
DNA (582bp) protein (194aa)
Hypothetical conserved protein Tax=uncultured gamma proteobacterium RepID=H5SAD6_9GAMM
Hypothetical conserved protein {ECO:0000313|EMBL:BAL53122.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteobacterium.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_6469_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(664..2481)
DNA (1818bp) protein (606aa)
ABC-type multidrug transport system component bin=GWD2_Deltaproteobacteria_55_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
MdlB; ABC-type multidrug/protein/lipid transport system, ATPase component
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_6469_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2482..4221)
DNA (1740bp) protein (580aa)
ABC transporter, ATP-binding/membrane protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter-like protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_6469_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4357..6192
DNA (1836bp) protein (612aa)
GTP-binding protein TypA/BipA bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
typA; GTP-binding protein TypA/BipA
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_6469_5
CSP1_5_NC10, NC10, Bacteria

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comp(6198..6599)
DNA (402bp) protein (134aa)
id=14429357 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_6469_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6627..6989)
DNA (363bp) protein (121aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002DC0C6F
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EDY19935.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
PLM4_65_b1_redo_sep16_scaffold_6469_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7073..8074)
DNA (1002bp) protein (334aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_6469_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8071..8364)
DNA (294bp) protein (98aa)
Thioredoxin Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I8G1_9EURY
thioredoxin
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_6469_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8361..11477)
DNA (3117bp) protein (1039aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_6469_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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11686..12300
DNA (615bp) protein (205aa)
Amino acid transporter bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio sp. U5L genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amino acid permease family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 10 items

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