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PLM4_65_b1_redo_sep16_scaffold_7208

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_7208_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..845)
DNA (843bp) protein (281aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
hypothetical protein Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI00037E2E44
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_7208_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1002..1481)
DNA (480bp) protein (160aa)
carbon monoxide dehydrogenase Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037A3A23
(2Fe-2S)-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_7208_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1516..2376)
DNA (861bp) protein (287aa)
Molybdopterin dehydrogenase FAD-binding bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
carbon monoxide dehydrogenase, medium subunit
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_7208_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2524..4809)
DNA (2286bp) protein (762aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_7208_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5033..5596)
DNA (564bp) protein (188aa)
(2Fe-2S)-binding domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
CoxS; aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_7208_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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6010..7083
DNA (1074bp) protein (358aa)
Iron complex ABC transporter substrate-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Phascolarctobacterium succinatutens genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
extracellular solute-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_7208_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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7175..8461
DNA (1287bp) protein (429aa)
5-nitroanthranilic acid aminohydrolase Tax=Bradyrhizobium sp. RepID=NAAA_BRASZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_7208_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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8655..10097
DNA (1443bp) protein (481aa)
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Uncharacterized protein {ECO:0000313|EMBL:ETX07066.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PLM4_65_b1_redo_sep16_scaffold_7208_9
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(10408..10911)
DNA (504bp) protein (168aa)
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyanthranilic acid dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
3-hydroxyanthranilate 3,4-dioxygenase Tax=Bacillus sp. 105MF RepID=UPI0003604017
3-hydroxyanthranilate 3,4-dioxygenase
PLM4_65_b1_redo_sep16_scaffold_7208_10
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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10978..11469
DNA (492bp) protein (164aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
Phosphodiesterase, MJ0936 family Tax=Variovorax paradoxus (strain S110) RepID=C5CSJ4_VARPS
phosphodiesterase
Displaying 10 items

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