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PLM4_65_b1_redo_sep16_scaffold_7783

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_7783_1
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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comp(1..453)
DNA (453bp) protein (151aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
Endonuclease MutS2 Tax=Nitrospina gracilis 3/211 RepID=M1YFX6_9BACT
mutS2; MutS2 protein
PLM4_65_b1_redo_sep16_scaffold_7783_2
R_RIF_OD1_11_51_15, RIF-OD1-11, Parcubacteria, Bacteria

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742..3141
DNA (2400bp) protein (800aa)
Type III restriction protein res subunit bin=GWB1_CP_36_13 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
type III restriction protein res subunit
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_51_15_curated
PLM4_65_b1_redo_sep16_scaffold_7783_3
R_RIF_OD1_11_51_15, RIF-OD1-11, Parcubacteria, Bacteria

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3282..4814
DNA (1533bp) protein (511aa)
type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
HsdM1 Tax=Azospirillum sp. CAG:239 RepID=R6J7Y8_9PROT
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_51_15_curated
PLM4_65_b1_redo_sep16_scaffold_7783_4
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4811..5971
DNA (1161bp) protein (387aa)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AKB61439.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKB61439.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei SarPi.;"
Restriction modification system DNA specificity domain Tax=Crocosphaera watsonii RepID=G5IYJ7_CROWT
restriction modification system DNA specificity subunit
PLM4_65_b1_redo_sep16_scaffold_7783_5
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5998..7053
DNA (1056bp) protein (352aa)
hypothetical protein Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI000368A251
putative nuclease of the RecB family
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
PLM4_65_b1_redo_sep16_scaffold_7783_6
unknown

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7053..7166
DNA (114bp) protein (38aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_7783_7
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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7136..9460
DNA (2325bp) protein (775aa)
hypothetical protein Tax=Salisaeta longa RepID=UPI0003B6624E
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
PLM4_65_b1_redo_sep16_scaffold_7783_8
unknown

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9572..9742
DNA (171bp) protein (57aa)
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_7783_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(10031..10951)
DNA (921bp) protein (307aa)
hypothetical protein bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
transposase
Tax=CSP1_2_Dadabacteria
PLM4_65_b1_redo_sep16_scaffold_7783_10
unknown

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comp(11019..11183)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 10 items

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