ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_3737

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3737_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

2..223
-----------------
DNA (222bp)
protein (74aa)
DinB family protein bin=bin3_NC10 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
DinB family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3737_2
unknown

Not on your lists

comp(359..556)
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3737_3
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1623..3620
-----------------
DNA (1998bp)
protein (666aa)
Transmembrane protein Tax=Burkholderia sp. SJ98 RepID=K8RGP6_9BURK
Transmembrane protein {ECO:0000313|EMBL:EKS70338.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3737_4
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(3872..5017)
-----------------
DNA (1146bp)
protein (382aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B203_HERA2
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Cys/Met metabolism pyridoxal-phosphate-dependent protein {ECO:0000313|EMBL:ABX05445.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM4_65_b1_redo_sep16_scaffold_3737_5
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5392..5991
-----------------
DNA (600bp)
protein (200aa)
Putative uncharacterized protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CVP4_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF92636.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM4_65_b1_redo_sep16_scaffold_3737_6
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6095..6523)
-----------------
DNA (429bp)
protein (143aa)
Nucleotide binding protein PINc bin=GWC2_Methylomirabilis_70_16 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=CG_Delta_06
PLM4_65_b1_redo_sep16_scaffold_3737_7
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6609..7892
-----------------
DNA (1284bp)
protein (428aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XG49_MICPN
Ca binding protein
Calcium-binding protein {ECO:0000313|EMBL:KGT76657.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
PLM4_65_b1_redo_sep16_scaffold_3737_8
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8065..10665)
-----------------
DNA (2601bp)
protein (867aa)
Serine/threonine kinase PKN8 Tax=Cystobacter fuscus DSM 2262 RepID=S9PNU2_9DELT
Serine/threonine kinase PKN8 {ECO:0000313|EMBL:EPX64676.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
protein kinase
PLM4_65_b1_redo_sep16_scaffold_3737_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11014..11790)
-----------------
DNA (777bp)
protein (259aa)
2-deoxy-D-gluconate 3-dehydrogenase Tax=mine drainage metagenome RepID=E6PWU6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDM66675.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
NAD dependent epimerase/dehydratase family protein
PLM4_65_b1_redo_sep16_scaffold_3737_10
BJP_08E140C01_10KDA_Chromatiales_49_130, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11800..14226)
-----------------
DNA (2427bp)
protein (809aa)
urh105A; unsaturated rhamnogalacturonyl hydrolase urh105A (EC:3.2.1.-)
Unsaturated rhamnogalacturonyl hydrolase urh105A Tax=Alishewanella agri BL06 RepID=I8U765_9ALTE
Tax=BJP_08E140C01_10KDA_Chromatiales_49_130
PLM4_65_b1_redo_sep16_scaffold_3737_11
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(14244..15005)
-----------------
DNA (762bp)
protein (254aa)
kduD; 2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125)
2-deoxy-D-gluconate 3-dehydrogenase bin=GWF2_Planctomycetes_42_9 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_b1_redo_sep16_scaffold_3737_12
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(15013..15891)
-----------------
DNA (879bp)
protein (293aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V410_TERSS
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_b1_redo_sep16_scaffold_3737_13
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15888..16304)
-----------------
DNA (417bp)
protein (139aa)
hexuranate MFS transporter Tax=Sphingomonas melonis RepID=UPI00035FB605
major facilitator superfamily transporter
Sugar phosphate permease {ECO:0000313|EMBL:ENZ82961.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
Displaying 13 items

View Taxonomy