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PLM4_65_b1_redo_sep16_scaffold_18333

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_18333_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1..150)
-----------------
DNA (150bp)
protein (50aa)
ABC efflux pump, inner membrane subunit bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
antimicrobial peptide ABC transporter permease
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_18333_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(182..1411)
-----------------
DNA (1230bp)
protein (410aa)
secretion protein HlyD; K02005 HlyD family secretion protein bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
secretion protein HlyD
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_18333_3

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1543..3273
-----------------
DNA (1731bp)
protein (577aa)
Putative transport protein (CPA2 family ) Tax=mine drainage metagenome RepID=E6PSE0_9ZZZZ
Putative transport protein (CPA2 family ) {ECO:0000313|EMBL:CBH97847.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
sodium/hydrogen exchanger
PLM4_65_b1_redo_sep16_scaffold_18333_4
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3341..3604
-----------------
DNA (264bp)
protein (88aa)
spoVT; SpoVT bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin9_gal15 organism_group=GAL15
spoVT; protein SpoVT
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_65_b1_redo_sep16_scaffold_18333_5
Thermus sp. NMX2.A1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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3607..4035
-----------------
DNA (429bp)
protein (143aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_52_8 species=Moorea producens genus=Moorea taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
PIN domain-containing protein
DNA-binding protein {ECO:0000313|EMBL:ETN88871.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. NMX2.A1.;"
PLM4_65_b1_redo_sep16_scaffold_18333_6
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4055..5653)
-----------------
DNA (1599bp)
protein (533aa)
Peptide chain release factor 3 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LGR5_HALO1
peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM4_65_b1_redo_sep16_scaffold_18333_7
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5783..7102
-----------------
DNA (1320bp)
protein (440aa)
peptidase M28 Tax=Kangiella aquimarina RepID=UPI00036CB2B2
Uncharacterized protein {ECO:0000313|EMBL:KFN49334.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
peptidase M28
Displaying 7 items

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