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PLM4_65_b1_redo_sep16_scaffold_19043

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_19043_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..225)
-----------------
DNA (225bp)
protein (75aa)
Phytanoyl-CoA dioxygenase Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWK2_PARL1
phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ABS64285.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PLM4_65_b1_redo_sep16_scaffold_19043_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(301..1371)
-----------------
DNA (1071bp)
protein (357aa)
hypothetical protein bin=bin1_lowGC species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM4_65_b1_redo_sep16_scaffold_19043_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1525..2376
-----------------
DNA (852bp)
protein (284aa)
Putative uncharacterized protein Tax=sulfur-oxidizing symbionts RepID=G2DE46_9GAMM
hypothetical protein
Tax=RBG_16_Gamma2_65_34_curated
PLM4_65_b1_redo_sep16_scaffold_19043_4
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2373..3368
-----------------
DNA (996bp)
protein (332aa)
Uncharacterized protein Tax=Cellvibrio sp. BR RepID=I3I9C0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD05986.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_19043_5
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

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3702..4115
-----------------
DNA (414bp)
protein (138aa)
PilT protein domain protein Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B5Y4_TURPD
PilT protein domain protein
PilT protein domain protein {ECO:0000313|EMBL:AFM12691.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H); (Leptospira parva).;"
PLM4_65_b1_redo_sep16_scaffold_19043_6
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4182..5183
-----------------
DNA (1002bp)
protein (334aa)
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000313|EMBL:ACY18297.1}; EC=1.5.99.11 {ECO:0000313|EMBL:ACY18297.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
5,10-methylenetetrahydromethanopterin reductase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIE1_HALO1
PLM4_65_b1_redo_sep16_scaffold_19043_7
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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comp(5211..6761)
-----------------
DNA (1551bp)
protein (517aa)
sensor histidine kinase (EC:2.7.3.-)
Sensor histidine kinase bin=GWC2_Methylomirabilis_70_24 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RBG_16_Acidobacteria_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_19043_8
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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comp(6748..6960)
-----------------
DNA (213bp)
protein (71aa)
Transcriptional regulatory protein DegU Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LFP8_THEPS
degU; transcriptional regulatory protein DegU
Tax=RBG_16_Acidobacteria_68_9_curated
Displaying 8 items

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