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PLM4_65_b1_redo_sep16_scaffold_31627

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_31627_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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1..267
-----------------
DNA (267bp)
protein (89aa)
undecaprenyl-phosphate glucose phosphotransferase (EC:2.7.8.6)
capsular polysaccharide synthesis protein (cpsA) bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_31627_2
unknown

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comp(302..706)
-----------------
DNA (405bp)
protein (135aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_31627_3
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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comp(737..1516)
-----------------
DNA (780bp)
protein (260aa)
NADH ubiquinone oxidoreductase 20 kDa subunit Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QXY0_ISOPI
NADH ubiquinone oxidoreductase 20 kDa subunit
Tax=GWC1_Treponema_61_84_curated
PLM4_65_b1_redo_sep16_scaffold_31627_4
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

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comp(1535..2956)
-----------------
DNA (1422bp)
protein (474aa)
NADH-ubiquinone oxidoreductase chain 49kDa bin=GWE1_Spirochaete_60_18 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
hydrogenase
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_31627_5
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(2953..4386)
-----------------
DNA (1434bp)
protein (478aa)
Ech-hydrogenase-related complex, HyfF-like integral membrane subunit bin=GWF2_Planctomycetes_50_10 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hydrogenase
Tax=GWF2_Planctomycetes_50_10_curated
PLM4_65_b1_redo_sep16_scaffold_31627_6
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(4390..5031)
-----------------
DNA (642bp)
protein (214aa)
NAD-dependent dehydrogenase subunit bin=GWF2_Lentisphaerae_57_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
NAD-dependent dehydrogenase subunit
Tax=GWF2_Lentisphaerae_57_35_curated
PLM4_65_b1_redo_sep16_scaffold_31627_7
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(5036..5941)
-----------------
DNA (906bp)
protein (302aa)
Formate hydrogenlyase subunit 4-like protein bin=GWF2_Planctomycetes_50_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
ehrB; Ech-hydrogenase-like complex NuoH-like integral membrane subunit
Tax=GWF2_Planctomycetes_50_10_curated
PLM4_65_b1_redo_sep16_scaffold_31627_8
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5973..7025)
-----------------
DNA (1053bp)
protein (351aa)
NADH/Ubiquinone/plastoquinone (Complex I) bin=GWF2_Planctomycetes_50_10 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
ehrA-2; Ech-hydrogenase-related complex, NuoL-like integral membrane lipoprotein subunit
Tax=BJP_IG2102_Desulfovibrionales_64_25
Displaying 8 items

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