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PLM4_65_b1_redo_sep16_scaffold_974

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_974_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1..1596
DNA (1596bp) protein (532aa)
hypothetical protein Tax=Dyella japonica RepID=UPI0002F34B69
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_974_2
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(1779..2894)
DNA (1116bp) protein (372aa)
ATP-dependent RNA helicase RhlE Tax=Ralstonia solanacearum K60-1 RepID=H5WBB8_RALSL
RNA helicase
Tax=RBG_16_Acidobacteria_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_974_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3165..6335)
DNA (3171bp) protein (1057aa)
Multidrug resistance protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABN7_GEMAT
multidrug resistance protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_974_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6353..7462)
DNA (1110bp) protein (370aa)
Secretion protein HlyD Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMH1_ANADE
secretion protein HlyD
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_974_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7507..9006)
DNA (1500bp) protein (500aa)
Outer membrane efflux protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABN9_GEMAT
outer membrane efflux protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_974_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9016..9660)
DNA (645bp) protein (215aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XLF5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33384.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM4_65_b1_redo_sep16_scaffold_974_7
unknown

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9863..10309
DNA (447bp) protein (149aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_974_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10311..11090
DNA (780bp) protein (260aa)
alpha/beta hydrolase Tax=Amycolatopsis methanolica RepID=UPI00037103E4
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_974_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11158..11532)
DNA (375bp) protein (125aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_974_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11546..12604)
DNA (1059bp) protein (353aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y7Y1_SORCE
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_974_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12597..13493)
DNA (897bp) protein (299aa)
Putative ABC transporter ATP-binding protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9G391_SORC5 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter ATPase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_974_12
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13581..14408
DNA (828bp) protein (276aa)
hypothetical protein Tax=Thioalkalivibrio sp. AKL8 RepID=UPI00037BD4A1
Lysophospholipase {ECO:0000313|EMBL:EWH03333.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_974_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

14405..15835
DNA (1431bp) protein (477aa)
Aromatic-L-amino-acid decarboxylase (EC:4.1.1.28)
Aromatic-L-amino-acid decarboxylase Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKJ7_MARHT
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_974_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15951..16838
DNA (888bp) protein (296aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A779_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_974_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17298..17573)
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD18_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_974_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17677..18474
DNA (798bp) protein (266aa)
dimethylargininase (EC:3.5.3.18)
Dimethylargininase Tax=Rhodanobacter spathiphylli B39 RepID=I4W486_9GAMM
Dimethylargininase {ECO:0000313|EMBL:EIL94277.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PLM4_65_b1_redo_sep16_scaffold_974_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18555..20225
DNA (1671bp) protein (557aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S5_GEMAT
Amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:AHG89988.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_974_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20230..21447)
DNA (1218bp) protein (406aa)
Multidrug resistance protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F8_GEMAT
multidrug resistance protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_974_19
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21444..23078)
DNA (1635bp) protein (545aa)
ABC superfamily ATP binding cassette transporter permease Tax=Desmospora sp. 8437 RepID=F5SGB0_9BACL
ABC superfamily ATP binding cassette transporter permease {ECO:0000313|EMBL:EGK11082.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
binding-protein-dependent transport system inner membrane protein
PLM4_65_b1_redo_sep16_scaffold_974_20
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(23075..24100)
DNA (1026bp) protein (342aa)
spermidine/putrescine ABC transporter ATPase (EC:3.6.3.31); K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] bin=bin9_gal15 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
ABC transporter
Tax=CSP1_3_Armatimonadetes
PLM4_65_b1_redo_sep16_scaffold_974_21
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24100..25206)
DNA (1107bp) protein (369aa)
iron ABC transporter substrate-binding protein Tax=Bacillus sp. AP8 RepID=UPI0002DC8AF1
Uncharacterized protein {ECO:0000313|EMBL:EFV78324.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 2_A_57_CT2.;"
iron ABC transporter substrate-binding protein
PLM4_65_b1_redo_sep16_scaffold_974_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25190..27664)
DNA (2475bp) protein (825aa)
Conserved uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q092G5_STIAD
LmbE family protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_974_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27739..28401)
DNA (663bp) protein (221aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_974_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

28612..30408
DNA (1797bp) protein (599aa)
Acyl-CoA dehydrogenase Tax=Micromonospora sp. ATCC 39149 RepID=C4RNS1_9ACTO bin=16ft_combo_ws3_JS1 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_974_25
unknown

Not on your lists

30488..30811
DNA (324bp) protein (108aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_974_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

30949..34080
DNA (3132bp) protein (1044aa)
Outer membrane autotransporter Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VWJ5_9BURK
RHS repeat-associated core domain-containing protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 26 items

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