ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_1154

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1154_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

183..1556
DNA (1374bp) protein (458aa)
Amino acid transporter Tax=Plesiocystis pacifica SIR-1 RepID=A6FXX2_9DELT
putative permease
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1154_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1630..4941
DNA (3312bp) protein (1104aa)
Putative oar protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA21_GEMAT
putative oar protein
Putative oar protein {ECO:0000313|EMBL:AHG91705.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_1154_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5113..6195)
DNA (1083bp) protein (361aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA17_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1154_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6192..7679)
DNA (1488bp) protein (496aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA16_GEMAT
permease YjgP/YjgQ family protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1154_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7728..13883
DNA (6156bp) protein (2052aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA15_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1154_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13880..14782
DNA (903bp) protein (301aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B4125B
peptidase M28
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1154_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14926..15555
DNA (630bp) protein (210aa)
Competence protein ComEA helix-hairpin-helix repeat protein Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LNS9_THEM4
helix-hairpin-helix repeat-containing competence protein ComEA
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1154_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15646..17349
DNA (1704bp) protein (568aa)
type II secretion system protein E
Type IV-A pilus assembly ATPase PilB bin=GWB2_Proteobacteria_55_19 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_1154_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17349..18542
DNA (1194bp) protein (398aa)
Twitching mobility protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA13_GEMAT
twitching motility protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_1154_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18560..19750
DNA (1191bp) protein (397aa)
Type IV pilus assembly protein PilC Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT
pilC; type IV pilus assembly protein PilC
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_1154_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19892..20854
DNA (963bp) protein (321aa)
Sodium/hydrogen exchanger Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJS4_RHOMR
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:AEN74465.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
PLM4_65_b1_redo_sep16_scaffold_1154_12
Halomonas titanicae, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20921..21628
DNA (708bp) protein (236aa)
Cation/H+ exchanger, CPA1 family Tax=Halomonas titanicae BH1 RepID=L9U8M4_9GAMM
Cation/H+ exchanger, CPA1 family {ECO:0000313|EMBL:ELY20588.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas titanicae BH1.;"
potassium/proton antiporter, CPA1 family
PLM4_65_b1_redo_sep16_scaffold_1154_13
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21600..26021)
DNA (4422bp) protein (1474aa)
DEAD/H box helicase domain protein Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IVL6_PSEUL
DEAD/H box helicase domain protein {ECO:0000313|EMBL:BAK77559.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
DEAD/DEAH box helicase
PLM4_65_b1_redo_sep16_scaffold_1154_14

Not on your lists

26267..26494
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN02796.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_b1_redo_sep16_scaffold_1154_15
unknown

Not on your lists

27065..28018
DNA (954bp) protein (318aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1154_16
unknown

Not on your lists

28144..28599
DNA (456bp) protein (152aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1154_17
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28715..29038)
DNA (324bp) protein (108aa)
hypothetical protein Tax=Nafulsella turpanensis RepID=UPI0003494FD9
amidase
Amidase {ECO:0000313|EMBL:AIZ64804.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
Displaying 17 items

View Taxonomy