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PLM4_65_b1_redo_sep16_scaffold_7754

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_7754_1
unknown

Not on your lists

comp(494..1276)
DNA (783bp) protein (261aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_7754_2
RLO_PLX_64_10, Bacteria

Not on your lists

1480..3060
DNA (1581bp) protein (527aa)
Ankyrin Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NN72_MARHT
ankyrin
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_b1_redo_sep16_scaffold_7754_3
unknown

Not on your lists

comp(3073..3336)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_7754_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3522..3836
DNA (315bp) protein (105aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_7754_5
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4036..5085
DNA (1050bp) protein (350aa)
hypothetical protein Tax=Myxococcus xanthus RepID=UPI00030CCBAB
NHL repeat protein {ECO:0000313|EMBL:ABF91442.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
NHL repeat-containing protein
PLM4_65_b1_redo_sep16_scaffold_7754_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5319..6089
DNA (771bp) protein (257aa)
Uncharacterized protein Tax=Fibrisoma limi BUZ 3 RepID=I2GFK4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92510.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_7754_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6136..7263
DNA (1128bp) protein (376aa)
PAS domain S-box protein Tax=Afipia felis ATCC 53690 RepID=K8NIL9_AFIFE
putative hybrid sensor histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_7754_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7260..7892
DNA (633bp) protein (211aa)
response regulator receiver, LuxR family
Response regulator with a HTH DNA-binding domain bin=GWC2_Ignavibacteria_56_12 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_7754_9
Streptomyces fulvissimus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7925..9862
DNA (1938bp) protein (646aa)
NHL repeat containing protein Tax=Streptomyces fulvissimus DSM 40593 RepID=N0CPT4_9ACTO
NHL repeat containing protein
Uncharacterized protein {ECO:0000313|EMBL:AGK75593.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fulvissimus DSM 40593.;"
PLM4_65_b1_redo_sep16_scaffold_7754_10
unknown

Not on your lists

9859..10272
DNA (414bp) protein (138aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_7754_11
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10623..10874
DNA (252bp) protein (84aa)
Putative gualylate cyclase protein Tax=Nitrolancetus hollandicus Lb RepID=I4EK85_9CHLR
gualylate cyclase protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM4_65_b1_redo_sep16_scaffold_7754_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10881..11951
DNA (1071bp) protein (357aa)
Plastocyanin-like protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQR1_KORVE
blue (type 1) copper domain protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:AHG89356.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_7754_13
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

11948..12361
DNA (414bp) protein (138aa)
Copper-binding protein, plastocyanin/azurin family Tax=Roseobacter sp. SK209-2-6 RepID=A4F0L4_9RHOB
blue (type 1) copper domain-containing protein
Tax=RBG_16_KB1_OP1_55_9_curated
PLM4_65_b1_redo_sep16_scaffold_7754_14
unknown

Not on your lists

12413..12880
DNA (468bp) protein (156aa)
hypothetical protein Tax=Gordonia kroppenstedtii RepID=UPI00036B6655
PLM4_65_b1_redo_sep16_scaffold_7754_15
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(13014..14051)
DNA (1038bp) protein (346aa)
Beta-lactamase Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1IZT0_DEIGD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ABF45254.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
PLM4_65_b1_redo_sep16_scaffold_7754_trna_1
unknown

Not on your lists

comp(14062..14145)
DNA (84bp)
transferRNA Ser
PLM4_65_b1_redo_sep16_scaffold_7754_16
unknown

Not on your lists

comp(14301..14693)
DNA (393bp) protein (131aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_7754_17
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14734..14886)
DNA (153bp) protein (51aa)
hypothetical protein
Putative uncharacterized protein bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_b1_redo_sep16_scaffold_7754_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14899..15543)
DNA (645bp) protein (215aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W4_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_7754_19
unknown

Not on your lists

comp(15584..15901)
DNA (318bp) protein (106aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_7754_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16174..19302)
DNA (3129bp) protein (1043aa)
Putative serine/threonine protein kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N9_GEMAT
protein kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_7754_21
unknown

Not on your lists

comp(19318..19956)
DNA (639bp) protein (213aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_7754_22
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20354..20962
DNA (609bp) protein (203aa)
Putative esterase Tax=Maricaulis maris (strain MCS10) RepID=Q0AL16_MARMM
putative esterase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
Displaying 23 items

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