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PLM4_65_b1_redo_sep16_scaffold_3609

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3609_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1..507)
DNA (507bp) protein (169aa)
Protein translocase subunit SecA Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=SECA_ACIC5
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
secA; Preprotein translocase subunit SecA
PLM4_65_b1_redo_sep16_scaffold_3609_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(619..1716)
DNA (1098bp) protein (366aa)
Serineaspartate repeat-containing protein I, putative Tax=Acanthamoeba castellanii str. Neff RepID=L8GQC6_ACACA
Uncharacterized protein {ECO:0000313|EMBL:CDM64671.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3609_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1856..2746
DNA (891bp) protein (297aa)
DEAD/DEAH box helicase domain protein Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QK74_DESB2
Superfamily II RNA helicase {ECO:0000313|EMBL:CDM64670.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DEAD/DEAH box helicase
PLM4_65_b1_redo_sep16_scaffold_3609_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2801..3193
DNA (393bp) protein (131aa)
DEAD/DEAH box helicase domain protein Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FDK9_DESAA
Superfamily II RNA helicase {ECO:0000313|EMBL:CDM64670.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DEAD/DEAH box helicase
PLM4_65_b1_redo_sep16_scaffold_3609_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3256..4665
DNA (1410bp) protein (470aa)
DEAD/DEAH box helicase domain protein Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QK74_DESB2
Superfamily II RNA helicase {ECO:0000313|EMBL:CDM64670.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DEAD/DEAH box helicase
PLM4_65_b1_redo_sep16_scaffold_3609_6
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4677..5618
DNA (942bp) protein (314aa)
alpha/beta hydrolase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627561
alpha/beta hydrolase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM4_65_b1_redo_sep16_scaffold_3609_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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5749..6321
DNA (573bp) protein (191aa)
translation elongation factor P Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4534E
translation elongation factor P
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_b1_redo_sep16_scaffold_3609_8
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6628..7311
DNA (684bp) protein (228aa)
Soluble lytic murein transglycosylase-like protein Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F8V1_DESDL
lytic murein transglycosylase
Soluble lytic murein transglycosylase-like protein {ECO:0000313|EMBL:AGA70254.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
PLM4_65_b1_redo_sep16_scaffold_3609_9
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7441..8040)
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XH87_METNJ
hypothetical protein
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI83756.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM; 25689 / JAM1).;"
PLM4_65_b1_redo_sep16_scaffold_3609_10
unknown

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8514..8807
DNA (294bp) protein (98aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3609_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8905..9762
DNA (858bp) protein (286aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Hydroxymethylbutenyl pyrophosphate reductase Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VZ21_DESAS
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
PLM4_65_b1_redo_sep16_scaffold_3609_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9964..10584)
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64668.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_3609_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10714..10965)
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64667.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_3609_14
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11370..12293
DNA (924bp) protein (308aa)
protease Do (EC:3.4.21.108)
peptidase Tax=Paracoccus sp. N5 RepID=UPI00037715E4
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM4_65_b1_redo_sep16_scaffold_3609_15
unknown

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comp(12434..12775)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3609_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13214..14083
DNA (870bp) protein (290aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin Tax=Nostoc sp. PCC 7107 RepID=K9QH32_9NOSO
Uncharacterized protein {ECO:0000313|EMBL:CDM64686.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
PLM4_65_b1_redo_sep16_scaffold_3609_17
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14086..14715
DNA (630bp) protein (210aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MG19_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE03614.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM4_65_b1_redo_sep16_scaffold_3609_18
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14712..16283
DNA (1572bp) protein (524aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MG20_CORCM
Putative membrane protein {ECO:0000313|EMBL:KIG15978.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
hypothetical protein
Displaying 18 items

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