ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_19644

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_19644_1
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20..1447)
DNA (1428bp) protein (476aa)
Amidase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR14_KORVE
Amidase {ECO:0000313|EMBL:AKB85075.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
amidase
PLM4_65_b1_redo_sep16_scaffold_19644_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1777..2448
DNA (672bp) protein (224aa)
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:CDM65069.1}; EC=1.3.5.1 {ECO:0000313|EMBL:CDM65069.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family (EC:1.3.99.1)
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE93_CHLTF
PLM4_65_b1_redo_sep16_scaffold_19644_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2452..4281
DNA (1830bp) protein (610aa)
Succinate dehydrogenase subunit A {ECO:0000313|EMBL:CDM65068.1}; EC=1.3.5.1 {ECO:0000313|EMBL:CDM65068.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein (EC:1.3.99.1)
Succinate dehydrogenase subunit A Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE92_CHLTF
PLM4_65_b1_redo_sep16_scaffold_19644_4
unknown

Not on your lists

4372..4527
DNA (156bp) protein (52aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_19644_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4506..5312
DNA (807bp) protein (269aa)
Succinate dehydrogenase subunit B {ECO:0000313|EMBL:CDM65067.1}; EC=1.3.99.1 {ECO:0000313|EMBL:CDM65067.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Succinate dehydrogenase iron-sulfur subunit Tax=Bacillus azotoformans LMG 9581 RepID=K6DGK1_BACAZ
sdhB; succinate dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_19644_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5474..6406)
DNA (933bp) protein (311aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Malate dehydrogenase Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WVI7_ACISM
malate dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_19644_7
unknown

Not on your lists

6702..6842
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 7 items

View Taxonomy