ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_15706

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_15706_1
unknown

Not on your lists

1..816
DNA (816bp) protein (272aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_15706_2
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

826..1374
DNA (549bp) protein (183aa)
TadE family protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C117_NITHN
TadE family protein
TadE family protein {ECO:0000313|EMBL:ADE14574.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PLM4_65_b1_redo_sep16_scaffold_15706_3
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1406..1891
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FVV4_SHESH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDM65518.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella sp. PE36.;"
PLM4_65_b1_redo_sep16_scaffold_15706_4
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1935..3158
DNA (1224bp) protein (408aa)
Response regulator receiver protein Tax=Rhodopirellula maiorica SM1 RepID=M5S313_9PLAN
Response regulator receiver protein {ECO:0000313|EMBL:EMI22027.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
cpaE; pilus assembly protein CpaE
PLM4_65_b1_redo_sep16_scaffold_15706_5
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3243..4571
DNA (1329bp) protein (443aa)
Type II secretion system protein E Tax=Geobacter sp. (strain M18) RepID=E8WNZ7_GEOS8
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ADW13888.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_b1_redo_sep16_scaffold_15706_6
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4586..5545
DNA (960bp) protein (320aa)
Putative type 2 secretion system protein Tax=Variovorax paradoxus B4 RepID=T1X9A0_VARPD
tadB; Flp pilus assembly protein TadB
Flp pilus assembly protein TadB {ECO:0000313|EMBL:AIY42969.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
PLM4_65_b1_redo_sep16_scaffold_15706_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

5594..6496
DNA (903bp) protein (301aa)
Type II secretion system protein Tax=Burkholderia pseudomallei RepID=A3NP13_BURP6
type II secretion system (T2SS), F family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_15706_8
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6541..7581
DNA (1041bp) protein (347aa)
hypothetical protein Tax=unclassified Alphaproteobacteria (miscellaneous) RepID=UPI00036DA805
tetratricopeptide repeat protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
Displaying 8 items

View Taxonomy