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PLM4_65_b1_redo_sep16_scaffold_8697

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_8697_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1..1173)
DNA (1173bp) protein (391aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65756.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative PHP family metal-dependent phosphoesterase bin=GWA2_OP3_52_12 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_8697_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1444..3645)
DNA (2202bp) protein (734aa)
Peptidase S9 prolyl oligopeptidase active site domain protein Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTK6_DYAFD
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ACT92949.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
PLM4_65_b1_redo_sep16_scaffold_8697_3
unknown

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comp(3954..4544)
DNA (591bp) protein (197aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_8697_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4900..6348)
DNA (1449bp) protein (483aa)
PLP-dependent enzyme, glutamate decarboxylase {ECO:0000313|EMBL:CDM65481.1}; EC=4.1.1.28 {ECO:0000313|EMBL:CDM65481.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein bin=bin9_gal15 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_8697_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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6702..7976
DNA (1275bp) protein (425aa)
Branched chain amino acid ABC transporter, periplasmic amino acid-binding protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09BF7_STIAD
branched chain amino acid ABC transporter periplasmic amino acid-binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM4_65_b1_redo_sep16_scaffold_8697_6
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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7995..8912
DNA (918bp) protein (306aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
amino acid ABC transporter
Tax=RBG_16_Zixibacteria_50_21_curated
PLM4_65_b1_redo_sep16_scaffold_8697_7
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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9013..10191
DNA (1179bp) protein (393aa)
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
branched-chain amino acid ABC transporter permease
Tax=RBG_16_Zixibacteria_43_9_curated
PLM4_65_b1_redo_sep16_scaffold_8697_8
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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10188..10565
DNA (378bp) protein (126aa)
Branched-chain amino acid transport system Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7Z1Q1_BDEBC
livG; branched-chain amino acid transport system
Branched-chain amino acid transport system {ECO:0000313|EMBL:AFY02980.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus str. Tiberius.;"
Displaying 8 items

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