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PLM4_65_b1_redo_sep16_scaffold_9451

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_9451_1
unknown

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comp(2..139)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_9451_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(175..1062)
DNA (888bp) protein (296aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
diaminopimelate epimerase
PLM4_65_b1_redo_sep16_scaffold_9451_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1231..3006)
DNA (1776bp) protein (592aa)
D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family {ECO:0000313|EMBL:CDM66825.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CDM66825.1};; EC=3.4.21.- {ECO:0000313|EMBL:CDM66825.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase Tax=Pedosphaera parvula Ellin514 RepID=B9XRU4_9BACT
PLM4_65_b1_redo_sep16_scaffold_9451_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2969..5443)
DNA (2475bp) protein (825aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:CDM64682.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CDM64682.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Serine/threonine protein kinase with TPR repeats Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIA4_KORVE
serine/threonin protein kinase
PLM4_65_b1_redo_sep16_scaffold_9451_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5559..6545)
DNA (987bp) protein (329aa)
D-heptose-7-phosphate 1-kinase {ECO:0000313|EMBL:CDM66826.1}; EC=2.7.1.167 {ECO:0000313|EMBL:CDM66826.1};; EC=2.7.7.70 {ECO:0000313|EMBL:CDM66826.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE bin=GWC2_Deltaproteobacteria_55_46 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
PfkB domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_9451_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6572..7756)
DNA (1185bp) protein (395aa)
Glycosyl transferase family 9 Tax=uncultured Acidobacteria bacterium RepID=H5SIS8_9BACT
ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:CDM66827.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ADP-heptose--LPS heptosyltransferase
PLM4_65_b1_redo_sep16_scaffold_9451_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(8382..9743)
DNA (1362bp) protein (454aa)
Cytochrome P450 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHY4_CHLTF
Cytochrome P450 {ECO:0000313|EMBL:CDM66829.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Cytochrome P450
PLM4_65_b1_redo_sep16_scaffold_9451_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9791..10132
DNA (342bp) protein (114aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INA9_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41641.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Displaying 8 items

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