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PLM4_65_b1_redo_sep16_scaffold_23463

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_23463_1
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(286..1338)
DNA (1053bp) protein (351aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
aspartate-semialdehyde dehydrogenase Tax=Elioraea tepidiphila RepID=UPI00036213CB
PLM4_65_b1_redo_sep16_scaffold_23463_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1546..1884
DNA (339bp) protein (113aa)
membrane protein Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0546
Uncharacterized protein {ECO:0000313|EMBL:ENY82032.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
membrane protein
PLM4_65_b1_redo_sep16_scaffold_23463_3
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1910..2305)
DNA (396bp) protein (132aa)
Blue-light-activated protein Tax=sulfur-oxidizing symbionts RepID=G2DCL8_9GAMM
PvrR
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
PLM4_65_b1_redo_sep16_scaffold_23463_4
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2514..2906)
DNA (393bp) protein (131aa)
Response regulator receiver modulated diguanylate phosphodiesterase Tax=Marichromatium purpuratum 984 RepID=F9TWG2_MARPU
Regulatory protein for cyclic-di-GMP, EAL domain {ECO:0000313|EMBL:EGV51602.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
cyclic-di-GMP regulatory protein
PLM4_65_b1_redo_sep16_scaffold_23463_5
unknown

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comp(2906..3109)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_23463_6
unknown

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comp(3467..3616)
DNA (150bp) protein (50aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_23463_7
unknown

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comp(3738..4163)
DNA (426bp) protein (142aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_23463_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4296..5411)
DNA (1116bp) protein (372aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
3-isopropylmalate dehydrogenase Tax=Oceanibaculum indicum P24 RepID=K2JNI7_9PROT
3-isopropylmalate dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_23463_9
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5580..5819)
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EVW1_EMTOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK03814.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
PLM4_65_b1_redo_sep16_scaffold_23463_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5918..6202)
DNA (285bp) protein (95aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit Tax=Rhodospirillum photometricum DSM 122 RepID=H6SL69_RHOPH
Displaying 10 items

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