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PLM4_65_b1_redo_sep16_scaffold_3161

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3161_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1058)
DNA (1056bp) protein (352aa)
MTR; Vitamin-B12 dependent methionine synthase (EC:2.1.1.13)
Methionine synthase Tax=alpha proteobacterium BAL199 RepID=A8TTR6_9PROT
Methionine synthase {ECO:0000313|EMBL:EDP64190.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
PLM4_65_b1_redo_sep16_scaffold_3161_2
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1055..1915)
DNA (861bp) protein (287aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Methylenetetrahydrofolate reductase Tax=alpha proteobacterium BAL199 RepID=A8TTR8_9PROT
5,10-methylenetetrahydrofolate reductase
PLM4_65_b1_redo_sep16_scaffold_3161_3
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1912..2892)
DNA (981bp) protein (327aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI000380817F
ArsR family transcriptional regulator {ECO:0000313|EMBL:EWY39400.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
ArsR family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_3161_4
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3145..3750
DNA (606bp) protein (202aa)
glyoxalase Tax=Verrucomicrobium spinosum RepID=UPI000174505E
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EKS67668.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM4_65_b1_redo_sep16_scaffold_3161_5
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3882..4997
DNA (1116bp) protein (372aa)
hypothetical protein Tax=Methyloferula stellata RepID=UPI00037BA683
OpgC protein
OpgC protein {ECO:0000313|EMBL:ACB95810.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
PLM4_65_b1_redo_sep16_scaffold_3161_6
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4946..5764
DNA (819bp) protein (273aa)
hypothetical protein Tax=Methyloferula stellata RepID=UPI00037CE998
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ACK51161.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
PLM4_65_b1_redo_sep16_scaffold_3161_7
RLO_PLX_64_10, Bacteria

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comp(5784..6461)
DNA (678bp) protein (226aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI000365A229
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_b1_redo_sep16_scaffold_3161_8
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6572..7735)
DNA (1164bp) protein (388aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2JTH6_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM4_65_b1_redo_sep16_scaffold_3161_9
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7732..9747)
DNA (2016bp) protein (672aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI000370DD43
C4-dicarboxylate transporter subuits DctM-Q
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM4_65_b1_redo_sep16_scaffold_3161_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9833..10381)
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Azospirillum brasilense Sp245 RepID=G8AP25_AZOBR
Membrane protein {ECO:0000313|EMBL:KJB92550.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3161_11
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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10497..11162
DNA (666bp) protein (222aa)
Cytochrome b Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTR2_9BURK
cytochrome B561
Tax=RBG_16_Gammaproteobacteria_57_12_curated
PLM4_65_b1_redo_sep16_scaffold_3161_12
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11358..14039
DNA (2682bp) protein (894aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
acnA; aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase Tax=Oceanibaculum indicum P24 RepID=K2J679_9PROT
PLM4_65_b1_redo_sep16_scaffold_3161_13
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14163..14846
DNA (684bp) protein (228aa)
Nitroreductase Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W1W6_9BURK
Nitroreductase {ECO:0000313|EMBL:EGF31153.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
nitroreductase family protein
PLM4_65_b1_redo_sep16_scaffold_3161_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14824..15324)
DNA (501bp) protein (167aa)
MarR family transcriptional regulator Tax=Rhodanobacter spathiphylli B39 RepID=I4VYU7_9GAMM
MarR family transcriptional regulator {ECO:0000313|EMBL:EIL92388.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator, MarR family protein
PLM4_65_b1_redo_sep16_scaffold_3161_15
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15528..15968
DNA (441bp) protein (147aa)
Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179}; EC=4.4.1.5 {ECO:0000256|RuleBase:RU361179};; Glyoxalase I {ECO:0000256|RuleBase:RU361179}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
Glyoxalase Tax=Oceanibaculum indicum P24 RepID=K2JJ43_9PROT
glyoxalase I
PLM4_65_b1_redo_sep16_scaffold_3161_16
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15973..16602
DNA (630bp) protein (210aa)
Glutathione S-transferase domain protein (EC:2.5.1.18)
Glutathione S-transferase domain Tax=Methylobacterium sp. (strain 4-46) RepID=B0UFQ4_METS4
Uncharacterized protein {ECO:0000313|EMBL:KJC48758.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
PLM4_65_b1_redo_sep16_scaffold_3161_17
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16649..17506
DNA (858bp) protein (286aa)
alpha/beta hydrolase fold protein (EC:3.3.2.9)
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CKI62436.1}; EC=3.3.2.10 {ECO:0000313|EMBL:CKI62436.1};; EC=3.3.2.9 {ECO:0000313|EMBL:CKI62436.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis.;"
Alpha/beta hydrolase fold protein Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0R6Y9_MYCS2
PLM4_65_b1_redo_sep16_scaffold_3161_18
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17515..18099)
DNA (585bp) protein (195aa)
hypothetical protein Tax=Methyloferula stellata RepID=UPI00038257EA
Conserved protein {ECO:0000313|EMBL:GAK43828.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3161_19
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18328..19674)
DNA (1347bp) protein (449aa)
Anaerobic glycerol-3-phosphate dehydrogenase subunit C Tax=alpha proteobacterium BAL199 RepID=A8TYY2_9PROT
Anaerobic glycerol-3-phosphate dehydrogenase subunit C {ECO:0000313|EMBL:EDP62548.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Anaerobic glycerol-3-phosphate dehydrogenase subunit C
PLM4_65_b1_redo_sep16_scaffold_3161_20
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19836..20255)
DNA (420bp) protein (140aa)
Rubrerythrin Tax=Oceanibaculum indicum P24 RepID=K2KLN5_9PROT
Rubrerythrin {ECO:0000313|EMBL:GAK43826.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
rubrerythrin
PLM4_65_b1_redo_sep16_scaffold_3161_21
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20518..20937)
DNA (420bp) protein (140aa)
Putative Peroxide-responsive repressor (PerR-like), fur family Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7U2_AZOL4
Fur family transcriptional regulator {ECO:0000313|EMBL:EWY40477.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative Peroxide-responsive repressor (PerR-like), fur family
PLM4_65_b1_redo_sep16_scaffold_3161_22
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(21040..22014)
DNA (975bp) protein (325aa)
Secretion protein HlyD Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121J1_POLSJ
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABE46801.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
PLM4_65_b1_redo_sep16_scaffold_3161_23
Grimontia hollisae, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22007..23761)
DNA (1755bp) protein (585aa)
protease Tax=Enterovibrio calviensis RepID=UPI0003004B40
ABC-type protease/lipase transport system ATPase and permease component {ECO:0000313|EMBL:EEY73618.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia hollisae CIP 101886.;"
aprD; Alkaline protease secretion ATP-binding protein AprD
PLM4_65_b1_redo_sep16_scaffold_3161_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23945..24733)
DNA (789bp) protein (263aa)
fabI; enoyl-ACP reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] Tax=Oceanibaculum indicum P24 RepID=K2JW47_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_3161_25
unknown

Not on your lists

comp(24821..25147)
DNA (327bp) protein (109aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3161_26
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25182..26414)
DNA (1233bp) protein (411aa)
3-oxoacyl-[acyl-carrier-protein] synthase 1 Tax=Methyloglobulus morosus KoM1 RepID=V5C0X0_9GAMM
fabB; 3-oxoacyl-ACP synthase
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM4_65_b1_redo_sep16_scaffold_3161_27
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26411..26938)
DNA (528bp) protein (176aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
3-hydroxydecanoyl-ACP dehydratase (EC:4.2.1.60)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase Tax=Microvirga sp. WSM3557 RepID=I4YYV2_9RHIZ
PLM4_65_b1_redo_sep16_scaffold_3161_28
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27171..27917)
DNA (747bp) protein (249aa)
Glycerophosphoryl diester phosphodiesterase Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z262_AZOL4
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:KJR66251.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
ugpQ; glycerophosphoryl diester phosphodiesterase
PLM4_65_b1_redo_sep16_scaffold_3161_29
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27954..28403)
DNA (450bp) protein (150aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI000362315F
Uncharacterized protein {ECO:0000313|EMBL:AKH99581.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
conserved exported protein of unknown function
PLM4_65_b1_redo_sep16_scaffold_3161_30
unknown

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comp(28779..29009)
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying 30 items

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