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PLM4_65_b1_redo_sep16_scaffold_3872

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3872_1
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..235
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Methyloglobulus morosus KoM1 RepID=V5C546_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESS73587.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3872_2
unknown

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260..370
DNA (111bp) protein (37aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3872_3
unknown

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comp(460..669)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3872_4
unknown

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comp(705..1022)
DNA (318bp) protein (106aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3872_5
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1117..2472)
DNA (1356bp) protein (452aa)
hypothetical protein Tax=Amphritea japonica RepID=UPI00037F15F3
Uncharacterized protein {ECO:0000313|EMBL:KJS34164.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3872_6
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2576..3250)
DNA (675bp) protein (225aa)
Tena Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INB8_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:EWY37690.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
tena
PLM4_65_b1_redo_sep16_scaffold_3872_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3320..3778
DNA (459bp) protein (153aa)
Thioesterase family protein Tax=Pseudovibrio sp. JE062 RepID=B6QX78_9RHOB
thioesterase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_65_b1_redo_sep16_scaffold_3872_8
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3782..4114)
DNA (333bp) protein (111aa)
Ferredoxin Tax=Acidiphilium RepID=A5FZD6_ACICJ
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ABQ30968.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
PLM4_65_b1_redo_sep16_scaffold_3872_9
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4135..4476)
DNA (342bp) protein (114aa)
Iron-sulfur cluster assembly accessory protein Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IR38_RHOCS
Iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:ACI97924.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM4_65_b1_redo_sep16_scaffold_3872_10
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4542..4946)
DNA (405bp) protein (135aa)
Hypothetical cytosolic protein Tax=alpha proteobacterium BAL199 RepID=A8TWP3_9PROT
Metal-sulfur cluster biosynthetic enzyme {ECO:0000313|EMBL:KJS34989.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3872_11
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4943..5407)
DNA (465bp) protein (155aa)
Putative Fe-S assembly protein (NifU-like) Tax=Azospirillum brasilense Sp245 RepID=G8AQC2_AZOBR
Nitrogen fixation protein NifU {ECO:0000313|EMBL:EWY37900.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative Fe-S assembly protein (NifU-like)
PLM4_65_b1_redo_sep16_scaffold_3872_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5407..6774)
DNA (1368bp) protein (456aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Cysteine desulfurase Tax=Azospirillum brasilense Sp245 RepID=G8AQC1_AZOBR
cysteine desulfurase
PLM4_65_b1_redo_sep16_scaffold_3872_13
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6771..8099)
DNA (1329bp) protein (443aa)
FeS assembly protein SufD Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IR42_RHOCS
FeS assembly protein SufD {ECO:0000313|EMBL:KJB92341.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
sufD; FeS assembly protein SufD
PLM4_65_b1_redo_sep16_scaffold_3872_14
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8096..8854)
DNA (759bp) protein (253aa)
ABC transporter involved in Fe-S cluster assembly SufC, ATP-binding protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZEF3_AZOL4
sufC; ABC transporter involved in Fe-S cluster assembly SufC, ATP-binding protein
Cysteine desulfurase {ECO:0000313|EMBL:KJR64553.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
PLM4_65_b1_redo_sep16_scaffold_3872_15
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8857..10305)
DNA (1449bp) protein (483aa)
Cysteine desulfurase activator complex subunit SufB Tax=Oceanibaculum indicum P24 RepID=K2JRQ2_9PROT
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:EKE78118.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
sufB; cysteine desulfurase activator complex subunit SufB
PLM4_65_b1_redo_sep16_scaffold_3872_16
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10341..10796)
DNA (456bp) protein (152aa)
Rrf2 family transcriptional regulator Tax=Fodinicurvata sediminis RepID=UPI0003B74C5F
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:EWY37895.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
rrf2 family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_3872_17
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10930..11559)
DNA (630bp) protein (210aa)
Hypothetical secreted protein Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSA9_GRABC
Putative secreted protein
Hypothetical secreted protein {ECO:0000313|EMBL:ABI62293.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
PLM4_65_b1_redo_sep16_scaffold_3872_18
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11755..12915)
DNA (1161bp) protein (387aa)
Cysteine desulfurase Tax=Azospirillum brasilense Sp245 RepID=G8AJY8_AZOBR
iscS; cysteine desulfurase
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM4_65_b1_redo_sep16_scaffold_3872_19
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12908..13642)
DNA (735bp) protein (245aa)
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441, ECO:0000313|EMBL:CCQ74479.1}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441, ECO:0000313|EMBL:CCQ74479.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
serine O-acetyltransferase Tax=Fodinicurvata sediminis RepID=UPI0003B3BE5B
PLM4_65_b1_redo_sep16_scaffold_3872_20
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13858..14547
DNA (690bp) protein (230aa)
Alpha/beta hydrolase Tax=Oceanibaculum indicum P24 RepID=K2KMV3_9PROT
Alpha/beta hydrolase {ECO:0000313|EMBL:EKE78855.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3872_21
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14780..15931)
DNA (1152bp) protein (384aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Anhydro-N-acetylmuramic acid kinase (EC:2.7.1.-)
Anhydro-N-acetylmuramic acid kinase Tax=Magnetospirillum gryphiswaldense RepID=A4TWJ6_9PROT
Displaying 21 items

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