ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_15608

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_15608_1
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..203
DNA (201bp) protein (67aa)
Bacterioferritin comigratory protein Tax=Oceanibaculum indicum P24 RepID=K2JW29_9PROT
Bacterioferritin comigratory protein {ECO:0000313|EMBL:EKE78772.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
bcp; bacterioferritin comigratory protein
PLM4_65_b1_redo_sep16_scaffold_15608_2
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(240..521)
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTN4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE09822.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
GYD domain superfamily
PLM4_65_b1_redo_sep16_scaffold_15608_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

587..1399
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=Azospirillum sp. (strain B510) RepID=D3NUU5_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI72174.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
PLM4_65_b1_redo_sep16_scaffold_15608_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1492..2184)
DNA (693bp) protein (231aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Oxidoreductase Tax=Oceanibaculum indicum P24 RepID=K2JTZ2_9PROT
Oxidoreductase {ECO:0000313|EMBL:EKE68620.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
PLM4_65_b1_redo_sep16_scaffold_15608_5
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2325..2564
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Ralstonia sp. PBA RepID=I9KTC7_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ03500.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_15608_6
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2632..3594)
DNA (963bp) protein (321aa)
Peptide chain release factor 2 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TSD5_PHAFV
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
peptide chain release factor 2
PLM4_65_b1_redo_sep16_scaffold_15608_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3968..4984)
DNA (1017bp) protein (339aa)
Putative ABC-type transport system extracellular binding protein ( substrate sulfonate/nitrate/taurine) Tax=Clostridium ultunense Esp RepID=M1Z5E1_9CLOT
Putative ABC-type transport system extracellular binding protein ( substrate sulfonate/nitrate/taurine) {ECO:0000313|EMBL:CCQ92748.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
alkanesulfonate ABC transporter substrate binding protein
PLM4_65_b1_redo_sep16_scaffold_15608_8
unknown

Not on your lists

comp(4978..5187)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_15608_9
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(5160..5981)
DNA (822bp) protein (274aa)
Binding-protein-dependent transport systems inner membrane component Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8H8_SPHTD
putative ABC transport proteins, inner membrane component
Putative ABC transport proteins, inner membrane component {ECO:0000313|EMBL:ACM05895.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM4_65_b1_redo_sep16_scaffold_15608_10
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(5982..6788)
DNA (807bp) protein (269aa)
hypothetical protein Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00031D540C
ABC transporter-like protein
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM4_65_b1_redo_sep16_scaffold_15608_11
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6865..7299)
DNA (435bp) protein (145aa)
Flavin-dependent oxidoreductase, methylene-tetrahydromethanopterin reductase Tax=Rhizobium sp. CF142 RepID=J2ATK8_9RHIZ
probable monooxygenase protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM4_65_b1_redo_sep16_scaffold_15608_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7323..7748)
DNA (426bp) protein (142aa)
Alpha/beta hydrolase fold protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ01_PSEUX
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEA27197.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying 12 items

View Taxonomy