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PLM4_65_b1_redo_sep16_scaffold_790

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_790_1
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75..761)
DNA (687bp) protein (229aa)
glutathione transferase (EC:2.5.1.18)
glutathione S-transferase Tax=Roseomonas sp. B5 RepID=UPI00030D0D8D
Glutathione S-transferase protein {ECO:0000313|EMBL:EHL97172.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
PLM4_65_b1_redo_sep16_scaffold_790_2
unknown

Not on your lists

comp(861..953)
DNA (93bp) protein (31aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_790_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(950..1969)
DNA (1020bp) protein (340aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_790_4
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2520..3500)
DNA (981bp) protein (327aa)
Phosphofructokinase Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CAF6_MYXFH
6-phosphofructokinase
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
PLM4_65_b1_redo_sep16_scaffold_790_5
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3626..4822
DNA (1197bp) protein (399aa)
CMP-binding protein Tax=Azoarcus toluclasticus RepID=UPI00037A8E87
CoA-transferase protein
Putative CoA-transferase protein, (Family III) {ECO:0000313|EMBL:CAI07268.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
PLM4_65_b1_redo_sep16_scaffold_790_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4834..5601)
DNA (768bp) protein (256aa)
enoyl-CoA hydratase Tax=Salinispora RepID=UPI00037B1C8C
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EXG79669.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
enoyl-CoA hydratase/isomerase
PLM4_65_b1_redo_sep16_scaffold_790_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5674..7146
DNA (1473bp) protein (491aa)
Amidase Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VNZ3_RHOPX
amidase
Amidase {ECO:0000313|EMBL:ADU42439.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
PLM4_65_b1_redo_sep16_scaffold_790_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7143..8093
DNA (951bp) protein (317aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase Tax=Herbaspirillum sp. CF444 RepID=J2KP12_9BURK
Alcohol dehydrogenase, zinc-dependent
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_790_9
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8142..9194)
DNA (1053bp) protein (351aa)
Uncharacterized protein Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AL32_PELPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK98052.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PLM4_65_b1_redo_sep16_scaffold_790_10
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(9191..10612)
DNA (1422bp) protein (474aa)
Putative uncharacterized protein Tax=Opitutaceae bacterium TAV5 RepID=H1IXP2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF93741.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
PLM4_65_b1_redo_sep16_scaffold_790_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10990..12306)
DNA (1317bp) protein (439aa)
C4-dicarboxylate ABC transporter permease Tax=Brevibacillus panacihumi W25 RepID=V6M877_9BACL
TRAP C4-dicarboxylate transport system permease DctM
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_790_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12316..12825)
DNA (510bp) protein (170aa)
Tripartite ATP-independent periplasmic transporter DctQ component Tax=Lysinibacillus fusiformis RepID=D7WPK0_9BACI
C4-dicarboxylate ABC transporter permease
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_790_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12886..13851)
DNA (966bp) protein (322aa)
hypothetical protein Tax=Bacillus fordii RepID=UPI00035DF6D1
TRAP dicarboxylate transporter, DctP subunit, putative
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_790_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13969..15339)
DNA (1371bp) protein (457aa)
hypothetical protein bin=bin7_NC10_sister species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
MmgE/PrpD family protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_790_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15363..16979)
DNA (1617bp) protein (539aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM96_9BACT
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_790_16
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17015..18625)
DNA (1611bp) protein (537aa)
hypothetical protein Tax=Mesorhizobium sp. WSM4349 RepID=UPI000370FBE2
Uncharacterized protein {ECO:0000313|EMBL:KGT77448.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_790_17
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18686..19846)
DNA (1161bp) protein (387aa)
Iron-containing alcohol dehydrogenase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NK58_ROSCS
iron-containing alcohol dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM4_65_b1_redo_sep16_scaffold_790_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19993..22083
DNA (2091bp) protein (697aa)
5-oxoprolinase (EC:3.5.2.9)
hydantoinase Tax=Sphingomonas wittichii RepID=UPI0002F6BFAB
N-methylhydantoinase A/acetone carboxylase, beta subunit {ECO:0000313|EMBL:KFC73900.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
PLM4_65_b1_redo_sep16_scaffold_790_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22089..23924
DNA (1836bp) protein (612aa)
5-oxoprolinase (ATP-hydrolyzing) Tax=Burkholderia sp. YI23 RepID=G8M9I4_9BURK
N-methylhydantoinase B {ECO:0000313|EMBL:KFC73899.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
5-oxoprolinase
PLM4_65_b1_redo_sep16_scaffold_790_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24035..25360
DNA (1326bp) protein (442aa)
Dioxygenase hydroxylase large component Tax=Achromobacter xylosoxidans C54 RepID=E5UCW3_ALCXX
ribosomal subunit interface protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_65_b1_redo_sep16_scaffold_790_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25357..25848
DNA (492bp) protein (164aa)
Aromatic-ring-hydroxylating dioxygenase beta subunit Tax=Variovorax paradoxus (strain S110) RepID=C5CZK6_VARPS
aromatic-ring-hydroxylating dioxygenase beta subunit
Aromatic-ring-hydroxylating dioxygenase beta subunit {ECO:0000313|EMBL:ACS21985.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
PLM4_65_b1_redo_sep16_scaffold_790_22
Pseudomonas sp. 20_BN, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25858..26445
DNA (588bp) protein (196aa)
TetR family transcriptional regulator Tax=Pseudomonas sp. G5(2012) RepID=S2EMQ3_9PSED
Transcriptional regulator {ECO:0000313|EMBL:CDZ94104.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 20_BN.;"
TetR family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_790_23
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26473..27639)
DNA (1167bp) protein (389aa)
Enolase superfamily protein Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGV7_9BRAD
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:CDX30372.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
Mandelate racemase/muconate lactonizing protein
PLM4_65_b1_redo_sep16_scaffold_790_24
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

27713..28825
DNA (1113bp) protein (371aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AB-629-E09 RepID=UPI00037A95E6
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:EES53747.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;"
dihydroorotate dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_790_25
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28822..29232)
DNA (411bp) protein (137aa)
Glyoxalase Tax=Pandoraea RepID=V5UJW5_9BURK
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AIU25611.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
PLM4_65_b1_redo_sep16_scaffold_790_26
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29330..30034
DNA (705bp) protein (235aa)
Blr3415 protein Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0EWC0_CUPNN
Blr3415 protein
Blr3415 protein {ECO:0000313|EMBL:AEI77114.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
PLM4_65_b1_redo_sep16_scaffold_790_27
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30147..31112
DNA (966bp) protein (322aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI00031881DE
putative periplasmic substrate binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM4_65_b1_redo_sep16_scaffold_790_28
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31194..32162
DNA (969bp) protein (323aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI00031881DE
putative periplasmic substrate binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM4_65_b1_redo_sep16_scaffold_790_29
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32298..32810
DNA (513bp) protein (171aa)
Candidate small permease component Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XY37_RAMTT
dctM; small permease
Candidate small permease component {ECO:0000313|EMBL:AEG94362.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
PLM4_65_b1_redo_sep16_scaffold_790_30
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32817..34127
DNA (1311bp) protein (437aa)
TRAP dicarboxylate transporter-DctM subunit bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP dicarboxylate transporter subunit DctM
Tax=RBG_16_Betaproteobacteria_66_20_curated
Displaying items 1-30 of 31 in total

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