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PLM4_65_b1_redo_sep16_scaffold_9302

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_9302_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..884)
DNA (882bp) protein (294aa)
Probable 6-phosphogluconate dehydrogenase protein Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IXH4_POLGS
6-phosphogluconate dehydrogenase
Probable 6-phosphogluconate dehydrogenase protein {ECO:0000313|EMBL:ADZ71597.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
PLM4_65_b1_redo_sep16_scaffold_9302_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1237..1524
DNA (288bp) protein (96aa)
Histone-like DNA-binding protein Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215I7_RHOPB
histone-like DNA-binding protein
Histone-like DNA-binding protein {ECO:0000313|EMBL:ABD87949.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM4_65_b1_redo_sep16_scaffold_9302_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2331..2948
DNA (618bp) protein (206aa)
Methyltransferase type 11 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUP9_SIDLE
methyltransferase type 11
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_65_b1_redo_sep16_scaffold_9302_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3039..3881
DNA (843bp) protein (281aa)
hypothetical protein Tax=Roseomonas sp. B5 RepID=UPI0002DD321F
phytanoyl-CoA dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_9302_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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3947..4918
DNA (972bp) protein (324aa)
Candidate periplasmic component bin=GWF2_Methylomirabilis_70_14 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP dicarboxylate transporter subunit DctP
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_b1_redo_sep16_scaffold_9302_6
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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4953..5462
DNA (510bp) protein (170aa)
Putative TRAP-type C4-dicarboxylate transport system, small permease component Tax=Azoarcus sp. (strain BH72) RepID=A1K7U8_AZOSB
dctQ3; putative TRAP-type C4-dicarboxylate transport system small permease
Putative TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:CAL94903.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
PLM4_65_b1_redo_sep16_scaffold_9302_7
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5459..6958
DNA (1500bp) protein (500aa)
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KIC48653.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. ANG-S1.;"
Candidate large permease component bin=GWA2_Methylomirabilis_73_35 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dctM3; putative TRAP-type C4-dicarboxylate transport system large permease
PLM4_65_b1_redo_sep16_scaffold_9302_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7079..7282)
DNA (204bp) protein (68aa)
Cold-shock protein Tax=Asticcacaulis sp. YBE204 RepID=V4NDP9_9CAUL
cold-shock DNA-binding domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_9302_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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7524..8441
DNA (918bp) protein (306aa)
DNA-formamidopyrimidine glycosylase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA-formamidopyrimidine glycosylase
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_b1_redo_sep16_scaffold_9302_10
unknown

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8579..9367
DNA (789bp) protein (263aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036E3E70
PLM4_65_b1_redo_sep16_scaffold_9302_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9427..10005
DNA (579bp) protein (193aa)
Regulatory protein, TetR Tax=Magnetospirillum gryphiswaldense RepID=A4TUK4_9PROT
Regulatory protein, TetR {ECO:0000313|EMBL:CAM74311.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
putative transcriptional regulator, TetR family
PLM4_65_b1_redo_sep16_scaffold_9302_12
unknown

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10116..10217
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 12 items

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