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PLM4_65_b1_redo_sep16_scaffold_4226

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4226_1
unknown

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comp(1..123)
DNA (123bp) protein (41aa)
Nucleotidyl transferase Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWM5_NITWN
nucleotidyl transferase
PLM4_65_b1_redo_sep16_scaffold_4226_2
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(120..1127)
DNA (1008bp) protein (336aa)
Putative phosphotransferase Tax=Caenispirillum salinarum AK4 RepID=K9H059_9PROT
Aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:CCQ72587.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM4_65_b1_redo_sep16_scaffold_4226_3
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1249..1662)
DNA (414bp) protein (138aa)
Putative uncharacterized protein Tax=Azospirillum amazonense Y2 RepID=G1Y4I3_9PROT
ATPase or kinase {ECO:0000313|EMBL:KJB96093.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
ATPase or kinase
PLM4_65_b1_redo_sep16_scaffold_4226_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1821..2870
DNA (1050bp) protein (350aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685, ECO:0000313|EMBL:KJB96092.1}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
trxB; thioredoxin reductase (EC:1.8.1.9)
Ferredoxin--NADP reductase Tax=Azospirillum sp. (strain B510) RepID=D3NY75_AZOS1
PLM4_65_b1_redo_sep16_scaffold_4226_5
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2912..3823
DNA (912bp) protein (304aa)
NAD-dependent epimerase/dehydratase Tax=Burkholderia sp. SJ98 RepID=K8R5T1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AHE52725.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
NAD-dependent epimerase/dehydratase
PLM4_65_b1_redo_sep16_scaffold_4226_6
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3847..4728)
DNA (882bp) protein (294aa)
pirin Tax=Dyella ginsengisoli RepID=UPI000349AD05
Uncharacterized protein {ECO:0000313|EMBL:KGM33648.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
pirin
PLM4_65_b1_redo_sep16_scaffold_4226_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4862..5773
DNA (912bp) protein (304aa)
Putative pirin Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5L4_AROAE
Pirin {ECO:0000313|EMBL:KJB94059.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
pirin
PLM4_65_b1_redo_sep16_scaffold_4226_8
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5800..6972)
DNA (1173bp) protein (391aa)
aspartate aminotransferase Tax=Variovorax paradoxus RepID=UPI000367DB19
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:EJL73396.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
class I and II aminotransferase
PLM4_65_b1_redo_sep16_scaffold_4226_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7036..9501)
DNA (2466bp) protein (822aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:KJB93408.1}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Sensor protein divL Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IV08_RHOCS
divL; sensor protein divL
PLM4_65_b1_redo_sep16_scaffold_4226_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9681..11081)
DNA (1401bp) protein (467aa)
Adenosylhomocysteinase Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ILJ5_AZOC5
S-adenosyl-L-homocysteine hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_4226_11
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11285..11920)
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEL1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX69963.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
addiction module protein
PLM4_65_b1_redo_sep16_scaffold_4226_12
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12024..12338)
DNA (315bp) protein (105aa)
Phosphotransferase system, phosphocarrier protein HPr Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VDZ5_CAUST
phosphotransferase system, phosphocarrier protein HPr
Uncharacterized protein {ECO:0000313|EMBL:KCZ45614.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
PLM4_65_b1_redo_sep16_scaffold_4226_13
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12335..12739)
DNA (405bp) protein (135aa)
PTS system permease (IIAMan), nitrogen regulatory IIA protein Tax=Azospirillum brasilense Sp245 RepID=G8AZB5_AZOBR
PTS fructose transporter subunit IIA
PTS system permease (IIAMan), nitrogen regulatory IIA protein {ECO:0000313|EMBL:CCD03274.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM4_65_b1_redo_sep16_scaffold_4226_14
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13019..14374)
DNA (1356bp) protein (452aa)
nucleotide-binding protein Tax=Fodinicurvata sediminis RepID=UPI0003B48917
Nucleotide-binding protein K678_12374 {ECO:0000256|HAMAP-Rule:MF_00636}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
conserved protein of unknown function, containing ATPase, P-loop-containing domain
PLM4_65_b1_redo_sep16_scaffold_4226_15
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14522..15319
DNA (798bp) protein (266aa)
Putative permease Tax=Caenispirillum salinarum AK4 RepID=K9H0W6_9PROT
Putative permease {ECO:0000313|EMBL:EKV31925.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
Auxin efflux carrier protein
Displaying 15 items

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