ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_4520

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4520_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..257)
DNA (255bp) protein (85aa)
ABC transporter permease Tax=Acidovorax sp. MR-S7 RepID=UPI000371F70C
inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_b1_redo_sep16_scaffold_4520_2
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(259..1866)
DNA (1608bp) protein (536aa)
High-affinity branched-chain amino acid transport system permease protein LivH Tax=Caenispirillum salinarum AK4 RepID=K9H043_9PROT
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:EKV30414.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
inner-membrane translocator
PLM4_65_b1_redo_sep16_scaffold_4520_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1885..2745)
DNA (861bp) protein (287aa)
ABC transporter related protein Tax=alpha proteobacterium BAL199 RepID=A8TJ65_9PROT
ABC transporter related protein {ECO:0000313|EMBL:EDP66676.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
braF; High-affinity branched-chain amino acid transport ATP-binding protein BraF
PLM4_65_b1_redo_sep16_scaffold_4520_4
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2742..4874)
DNA (2133bp) protein (711aa)
long-chain fatty acid--CoA ligase Tax=Caldimonas manganoxidans RepID=UPI0003732778
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:BAQ70920.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidophilum (Rhodobacter sulfidophilus).;"
long-chain-fatty-acid--CoA ligase
PLM4_65_b1_redo_sep16_scaffold_4520_5
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5163..11309)
DNA (6147bp) protein (2049aa)
PAS/PAC sensor hybrid histidine kinase Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XRI0_9RHIZ
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:EMS40183.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
histidine kinase
PLM4_65_b1_redo_sep16_scaffold_4520_6
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11436..12512)
DNA (1077bp) protein (359aa)
Beta-lactamase-like protein Tax=Magnetospirillum sp. SO-1 RepID=M2ZTK9_9PROT
Beta-lactamase-like protein {ECO:0000313|EMBL:EME70712.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
beta-lactamase-like
PLM4_65_b1_redo_sep16_scaffold_4520_7
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12509..13288)
DNA (780bp) protein (260aa)
Predicted hydrolase or acyltransferase Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAZ9_MAGSA
hydrolase or acyltransferase
Predicted hydrolase or acyltransferase {ECO:0000313|EMBL:BAE48976.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
PLM4_65_b1_redo_sep16_scaffold_4520_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13306..14094)
DNA (789bp) protein (263aa)
Putative hydrolase (Alpha/beta hydrolase superfamily) Tax=Bradyrhizobium sp. STM 3809 RepID=H0SYX9_9BRAD
Alpha/beta hydrolase {ECO:0000313|EMBL:KJB92120.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
alpha/beta hydrolase
PLM4_65_b1_redo_sep16_scaffold_4520_9
unknown

Not on your lists

comp(14129..14545)
DNA (417bp) protein (139aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4520_10
unknown

Not on your lists

comp(14623..14838)
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying 10 items

View Taxonomy