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PLM4_65_b1_redo_sep16_scaffold_4753

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4753_1
unknown

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3..101
DNA (99bp) protein (33aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4753_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(164..916)
DNA (753bp) protein (251aa)
ABC transporter Tax=Azospirillum brasilense Sp245 RepID=G8AXP7_AZOBR
ABC transporter
ABC transporter {ECO:0000313|EMBL:CCD02656.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM4_65_b1_redo_sep16_scaffold_4753_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(913..1665)
DNA (753bp) protein (251aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI000365D6C7
ABC transporter {ECO:0000313|EMBL:EKE76548.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ABC transporter
PLM4_65_b1_redo_sep16_scaffold_4753_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1662..2480)
DNA (819bp) protein (273aa)
ABC transporter Tax=Oceanibaculum indicum P24 RepID=K2JPU3_9PROT
ABC transporter {ECO:0000313|EMBL:EKE76547.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
nitrate ABC transporter ATPase
PLM4_65_b1_redo_sep16_scaffold_4753_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2480..3442)
DNA (963bp) protein (321aa)
Bacterial periplasmic substrate-binding protein Tax=Azospirillum brasilense Sp245 RepID=G8AXQ0_AZOBR
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIB15864.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM4_65_b1_redo_sep16_scaffold_4753_6
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3578..4570)
DNA (993bp) protein (331aa)
4,5-dihydroxyphthalate decarboxylase Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAN2_PELHB
4,5-dihydroxyphthalate decarboxylase
4,5-dihydroxyphthalate decarboxylase {ECO:0000313|EMBL:AEQ52555.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
PLM4_65_b1_redo_sep16_scaffold_4753_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4754..5731)
DNA (978bp) protein (326aa)
Bacterial periplasmic substrate-binding protein Tax=Azospirillum brasilense Sp245 RepID=G8AXQ0_AZOBR
bacterial periplasmic substrate-binding protein
Bacterial periplasmic substrate-binding protein {ECO:0000313|EMBL:CCD02659.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM4_65_b1_redo_sep16_scaffold_4753_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5884..7359)
DNA (1476bp) protein (492aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
glutamyl-tRNA(Gln) amidotransferase Tax=Elioraea tepidiphila RepID=UPI000373A574
gatA; glutamyl-tRNA amidotransferase, subunit A
PLM4_65_b1_redo_sep16_scaffold_4753_9
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7362..7649)
DNA (288bp) protein (96aa)
Glutamyl-tRNA(Gln) amidotransferase subunit C (modular protein) (EC:6.3.5.-)
glutamyl-tRNA amidotransferase subunit C Tax=Ponticaulis koreensis RepID=UPI0003B6D79B
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4753_10
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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7781..8254
DNA (474bp) protein (158aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
Putative Holliday junction resolvase Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX15_PARL1
Holliday junction resolvase YqgF
PLM4_65_b1_redo_sep16_scaffold_4753_11
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8744..9673)
DNA (930bp) protein (310aa)
phospholipase Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B4369D
putative secreted hydrolase
Tax=RBG_16_Gamma2_64_11_curated
PLM4_65_b1_redo_sep16_scaffold_4753_12
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9764..10696)
DNA (933bp) protein (311aa)
phospholipase Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B755B4
putative secreted hydrolase
Tax=RBG_16_Gamma2_64_11_curated
PLM4_65_b1_redo_sep16_scaffold_4753_13
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10814..12031
DNA (1218bp) protein (406aa)
CoA transferase Tax=Fodinicurvata sediminis RepID=UPI0003B3FDD2
CoA transferase {ECO:0000313|EMBL:EWY41880.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
CaiB
PLM4_65_b1_redo_sep16_scaffold_4753_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12216..12503
DNA (288bp) protein (96aa)
Predicted protein Tax=Monosiga brevicollis RepID=A9V5S7_MONBE
Uncharacterized protein {ECO:0000313|EMBL:KFC72887.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_4753_15
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12689..13123
DNA (435bp) protein (145aa)
CBS domain-containing protein Tax=Streptomyces sp. WM6352 RepID=U5YMM1_9ACTO
XRE family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM4_65_b1_redo_sep16_scaffold_4753_16
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13296..14276
DNA (981bp) protein (327aa)
Uncharacterized protein Tax=Joostella marina DSM 19592 RepID=I3C1A6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ37399.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_4753_17
unknown

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comp(14296..14424)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 17 items

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