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PLM4_65_b1_redo_sep16_scaffold_1007

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1007_1
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..974)
DNA (972bp) protein (324aa)
choline dehydrogenase (EC:1.1.99.1)
Alcohol dehydrogenase Tax=Agrobacterium albertimagni AOL15 RepID=K2PIY0_9RHIZ
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM4_65_b1_redo_sep16_scaffold_1007_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1129..2844
DNA (1716bp) protein (572aa)
hypothetical protein Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI0003716C21
Uncharacterized protein {ECO:0000313|EMBL:ETX05330.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
D-aminoacylase domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_1007_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2906..3112
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZAP0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_b1_redo_sep16_scaffold_1007_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3109..3483
DNA (375bp) protein (125aa)
Ribonuclease VapC Tax=uncultured bacterium RepID=K1ZTC9_9BACT
twitching motility protein PilT
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_1007_5
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3520..4179)
DNA (660bp) protein (220aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
methionine sulfoxide reductase A Tax=Chlorogloeopsis RepID=UPI0002E321B6
msrA; methionine-s-sulfoxide reductase
PLM4_65_b1_redo_sep16_scaffold_1007_6
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4308..5549)
DNA (1242bp) protein (414aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TVW0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP63429.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
major facilitator superfamily protein
PLM4_65_b1_redo_sep16_scaffold_1007_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5788..6276
DNA (489bp) protein (163aa)
RNA polymerase subunit sigma-24 Tax=Acidovorax radicis RepID=UPI0002376259
sigma-24 (FecI)
Tax=RBG_16_Gamma2_65_34_curated
PLM4_65_b1_redo_sep16_scaffold_1007_8
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6278..7036
DNA (759bp) protein (253aa)
Putative transmembrane anti-sigma factor Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7L3N9_METC4
transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ACK86447.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
PLM4_65_b1_redo_sep16_scaffold_1007_9
unknown

Not on your lists

7314..7565
DNA (252bp) protein (84aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1007_10
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7795..8817
DNA (1023bp) protein (341aa)
hypothetical protein Tax=Nevskia ramosa RepID=UPI0003B79E48
luciferase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_65_b1_redo_sep16_scaffold_1007_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8838..9602
DNA (765bp) protein (255aa)
Possible ribulose-5-phosphate 4-epimerase and related epimerases Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YKY5_MOBAS
putative ribulose-5-phosphate 4-epimerase-like epimerase
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_1007_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9689..10717
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00037EF18C
SO0456; putative periplasmic binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_65_b1_redo_sep16_scaffold_1007_13
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10760..11788
DNA (1029bp) protein (343aa)
Putative periplasmic binding protein Tax=Alcanivorax pacificus W11-5 RepID=K2GPJ1_9GAMM
putative periplasmic binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM4_65_b1_redo_sep16_scaffold_1007_14
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11796..12527
DNA (732bp) protein (244aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_65_b1_redo_sep16_scaffold_1007_15
unknown

Not on your lists

comp(12532..12948)
DNA (417bp) protein (139aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1007_16
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13159..14175
DNA (1017bp) protein (339aa)
Putative periplasmic binding protein Tax=Alcanivorax pacificus W11-5 RepID=K2GPJ1_9GAMM
putative periplasmic binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_65_b1_redo_sep16_scaffold_1007_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14195..16285
DNA (2091bp) protein (697aa)
C4-dicarboxylate ABC transporter Tax=Azoarcus toluclasticus RepID=UPI000382694F
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_1007_18
unknown

Not on your lists

comp(16296..16658)
DNA (363bp) protein (121aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1007_19
unknown

Not on your lists

17063..18610
DNA (1548bp) protein (516aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1007_20
unknown

Not on your lists

18624..19499
DNA (876bp) protein (292aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1007_21
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19614..20696)
DNA (1083bp) protein (361aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Sugar ABC transporter, ATP-binding component Tax=Azospirillum brasilense Sp245 RepID=G8AE57_AZOBR
glycerol-3-phosphate ABC transporter ATP-binding protein
PLM4_65_b1_redo_sep16_scaffold_1007_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20726..21574)
DNA (849bp) protein (283aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI000370BC13
sugar ABC transporter permease
Tax=BJP_08E140C01_Burkholderiales_65_30
PLM4_65_b1_redo_sep16_scaffold_1007_23
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21574..22455)
DNA (882bp) protein (294aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI00037BAE3E
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:KGM38259.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
h16_A2329; ABC transporter permease
PLM4_65_b1_redo_sep16_scaffold_1007_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22546..23856)
DNA (1311bp) protein (437aa)
Extracellular solute-binding protein, family 1 Tax=alpha proteobacterium BAL199 RepID=A8U109_9PROT
ugpB; sn-glycerol-3-phosphate ABC transporter substrate binding protein UgpB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_1007_25
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24096..25250
DNA (1155bp) protein (385aa)
Amidohydrolase Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EN17_STRRM
Uncharacterized protein {ECO:0000313|EMBL:KJS05000.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
PLM4_65_b1_redo_sep16_scaffold_1007_26
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25257..26465)
DNA (1209bp) protein (403aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI000306B563
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_65_b1_redo_sep16_scaffold_1007_27
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26541..27707)
DNA (1167bp) protein (389aa)
Transporter, major facilitator family protein Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUG5_9PROT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EHM03349.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
arabinose ABC transporter permease
PLM4_65_b1_redo_sep16_scaffold_1007_28
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27890..28657
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Lutibaculum baratangense AMV1 RepID=V4R9B0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR22786.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1007_29
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28692..29474
DNA (783bp) protein (261aa)
Putative integral membrane protein Tax=Caenispirillum salinarum AK4 RepID=K9H179_9PROT
Putative integral membrane protein {ECO:0000313|EMBL:EKV31307.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1007_30
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29594..30175
DNA (582bp) protein (194aa)
Cysteine dioxygenase type I Tax=Oceanibaculum indicum P24 RepID=K2J3Q7_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying items 1-30 of 31 in total

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