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PLM4_65_b1_redo_sep16_scaffold_1786

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1786_1
unknown

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3..185
DNA (183bp) protein (61aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1786_2
unknown

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comp(742..1098)
DNA (357bp) protein (119aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1786_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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comp(1162..1410)
DNA (249bp) protein (83aa)
Histone H1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I6N4_RHOVT
histone H1
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM4_65_b1_redo_sep16_scaffold_1786_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1645..2676
DNA (1032bp) protein (344aa)
Fatty acid desaturase Tax=Azospirillum sp. (strain B510) RepID=D3NTP1_AZOS1
desA; fatty acid desaturase
Fatty acid desaturase {ECO:0000313|EMBL:BAI71770.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
PLM4_65_b1_redo_sep16_scaffold_1786_5
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2933..3205
DNA (273bp) protein (91aa)
Translation initiation factor IF-1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9J0_PHEZH
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
PLM4_65_b1_redo_sep16_scaffold_1786_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3387..5213
DNA (1827bp) protein (609aa)
GTP-binding protein Tax=Oceanibaculum indicum P24 RepID=K2JDJ6_9PROT
GTP-binding protein {ECO:0000313|EMBL:EKE68624.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
typA; GTP-binding protein typA/bipA
PLM4_65_b1_redo_sep16_scaffold_1786_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5643..6638
DNA (996bp) protein (332aa)
Hypothetical lipoprotein Tax=Alcaligenes xylosoxydans xylosoxydans RepID=Q5GRD1_ALCXX
Hypothetical lipoprotein {ECO:0000313|EMBL:CAI47837.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
NMT1-like family protein
PLM4_65_b1_redo_sep16_scaffold_1786_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6800..7465
DNA (666bp) protein (222aa)
Ureidoglycolate hydrolase Tax=Burkholderia sp. Ch1-1 RepID=I2IQ44_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_1786_9
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7462..8691
DNA (1230bp) protein (410aa)
Sodium/hydrogen exchanger Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4Q6_9RHIZ
Sodium/hydrogen exchanger {ECO:0000313|EMBL:EHH13328.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
sodium/hydrogen exchanger
PLM4_65_b1_redo_sep16_scaffold_1786_10
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8684..9187)
DNA (504bp) protein (168aa)
Cupin 2 conserved barrel domain protein Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TGF6_BURPP
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ACD20128.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
PLM4_65_b1_redo_sep16_scaffold_1786_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(9192..10145)
DNA (954bp) protein (318aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_1786_12
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10142..11017)
DNA (876bp) protein (292aa)
ABC transporter, nucleotide binding/ATPase protein Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CGV7_AGRT5
ABC transporter permease
ABC transporter, nucleotide binding/ATPase protein {ECO:0000313|EMBL:AAK88847.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium; tumefaciens (strain C58)).;"
PLM4_65_b1_redo_sep16_scaffold_1786_13
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11014..11997)
DNA (984bp) protein (328aa)
Uncharacterized protein Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CGV5_AGRT5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK88849.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium; tumefaciens (strain C58)).;"
PLM4_65_b1_redo_sep16_scaffold_1786_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12039..12833)
DNA (795bp) protein (265aa)
ABC transporter, membrane spanning protein Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CGV6_AGRT5
ABC transporter, membrane spanning protein {ECO:0000313|EMBL:CDN95355.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
ABC transporter permease
PLM4_65_b1_redo_sep16_scaffold_1786_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12830..13660)
DNA (831bp) protein (277aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI0002D7ABC4
Transcriptional regulatory protein {ECO:0000313|EMBL:KFC70416.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
IclR family transcriptional regulator protein
PLM4_65_b1_redo_sep16_scaffold_1786_16
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(13776..14240)
DNA (465bp) protein (155aa)
Putative uncharacterized protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VMC5_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX76911.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
PLM4_65_b1_redo_sep16_scaffold_1786_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14367..15260)
DNA (894bp) protein (298aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component Tax=Polaromonas sp. CF318 RepID=J2TFS7_9BURK
Bradyrhizobium elkanii strain UASWS1015 Contig164, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51593.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
diguanylate cyclase
PLM4_65_b1_redo_sep16_scaffold_1786_18
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15478..16419)
DNA (942bp) protein (314aa)
Putative ABC transporter permease protein dipeptide transport protein Tax=Bradyrhizobium sp. STM 3809 RepID=H0SYT7_9BRAD
Putative ABC transporter permease protein dipeptide transport protein {ECO:0000313|EMBL:CCD99364.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
peptide ABC transporter
PLM4_65_b1_redo_sep16_scaffold_1786_19
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16625..18145)
DNA (1521bp) protein (507aa)
Putative glutathione transporter,solute-binding component Tax=Lutibaculum baratangense AMV1 RepID=V4RHJ7_9RHIZ
Putative glutathione transporter,solute-binding component {ECO:0000313|EMBL:ESR25596.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
ABC transporter substrate-binding protein
PLM4_65_b1_redo_sep16_scaffold_1786_20
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18371..18694)
DNA (324bp) protein (108aa)
excinuclease ABC subunit C Tax=Fodinicurvata sediminis RepID=UPI0003B43E2B
Excinuclease ABC subunit C {ECO:0000313|EMBL:KGT78839.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
excinuclease ABC C subunit domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_1786_21
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18867..19928)
DNA (1062bp) protein (354aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein Tax=Polaromonas sp. CF318 RepID=J2KAF6_9BURK
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC54966.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter ATP-binding protein
PLM4_65_b1_redo_sep16_scaffold_1786_22
bacterium YEK0313, Bacteria

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comp(19925..20908)
DNA (984bp) protein (328aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein Tax=Bradyrhizobium sp. WSM471 RepID=H5YGM9_9BRAD
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CEJ15076.1}; species="Bacteria.;" source="bacterium YEK0313.;"
dppD; peptide ABC transporter ATP-binding protein
PLM4_65_b1_redo_sep16_scaffold_1786_23
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20908..21627)
DNA (720bp) protein (240aa)
Putative uncharacterized protein Tax=Bradyrhizobium sp. WSM471 RepID=H5YGN0_9BRAD
Pilus assembly protein {ECO:0000313|EMBL:KJC54968.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1786_24
R_NC10_66_22, NC10, Bacteria

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21958..23652
DNA (1695bp) protein (565aa)
hypothetical protein Tax=Chryseobacterium taeanense RepID=UPI0003803149
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 24 items

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