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PLM4_65_b1_redo_sep16_scaffold_25371

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_25371_1
unknown

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comp(3..116)
DNA (114bp) protein (38aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_25371_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(160..1308)
DNA (1149bp) protein (383aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TZC0_9BRAD
peptidase C14 caspase catalytic subunit p20
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_25371_3
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1513..2505
DNA (993bp) protein (331aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI00035C1B5B
Uncharacterized protein {ECO:0000313|EMBL:KGM49793.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
dctP; TRAP dicarboxylate transporter subunit DctP
PLM4_65_b1_redo_sep16_scaffold_25371_4
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2513..3058
DNA (546bp) protein (182aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI0003603373
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:ETX28783.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax isoporae LMG 25204.;"
dctQ3; TRAP dicarboxylate transporter subunit DctQ
PLM4_65_b1_redo_sep16_scaffold_25371_5
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3064..4377
DNA (1314bp) protein (438aa)
UPI0003CE4959 related cluster Tax=unknown RepID=UPI0003CE4959
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KGM49795.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
dctM4; TRAP dicarboxylate transporter, subunit DctM
PLM4_65_b1_redo_sep16_scaffold_25371_6
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4374..5792
DNA (1419bp) protein (473aa)
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:EUB97682.1}; EC=1.1.2.4 {ECO:0000313|EMBL:EUB97682.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
FAD/FMN-dependent dehydrogenase Tax=Rhizobium sp. CF080 RepID=J3CVA7_9RHIZ
FAD linked oxidase domain protein
PLM4_65_b1_redo_sep16_scaffold_25371_7
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5761..5934)
DNA (174bp) protein (58aa)
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
tRNA (guanine-N(7)-)-methyltransferase Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVL5_RHOCS
Displaying 7 items

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