ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_6584

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6584_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1173
DNA (1173bp) protein (391aa)
Adenylate and Guanylate cyclase catalytic domain protein Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPC5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGM31429.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
adenylate cyclase
PLM4_65_b1_redo_sep16_scaffold_6584_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1163..1636)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YBC0_THIV6
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_65_b1_redo_sep16_scaffold_6584_3
Acetobacter malorum, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1762..2664)
DNA (903bp) protein (301aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter malorum.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZJ79_GLUDA
PLM4_65_b1_redo_sep16_scaffold_6584_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2937..3305
DNA (369bp) protein (123aa)
Cupin_2 domain containing protein bin=GWA2_Methylomirabilis_73_35 species=Pyrobaculum sp. 1860 genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Cupin 2 conserved barrel domain protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_b1_redo_sep16_scaffold_6584_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3383..4747
DNA (1365bp) protein (455aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO Tax=Oceanibaculum indicum P24 RepID=K2JZ41_9PROT
gid; glucose inhibited division protein
PLM4_65_b1_redo_sep16_scaffold_6584_6
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4817..5071
DNA (255bp) protein (85aa)
hypothetical protein Tax=Methylocystis parvus RepID=UPI00037E117B
Uncharacterized protein {ECO:0000313|EMBL:KJR65894.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_6584_7
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5068..5913)
DNA (846bp) protein (282aa)
Squalene Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISN3_RHOCS
Phytoene synthase {ECO:0000313|EMBL:EWY37005.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
squalene
PLM4_65_b1_redo_sep16_scaffold_6584_8
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6118..6720
DNA (603bp) protein (201aa)
Dihydrolipoamide dehydrogenase protein Tax=alpha proteobacterium RS24 RepID=U2WD46_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS64646.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PLM4_65_b1_redo_sep16_scaffold_6584_9
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7292..8245)
DNA (954bp) protein (318aa)
Protein-export membrane protein SecF Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISI3_RHOCS
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
secF; protein-export membrane protein SecF
PLM4_65_b1_redo_sep16_scaffold_6584_10
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8269..9894)
DNA (1626bp) protein (542aa)
Protein translocase subunit SecD Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISM9_RHOCS
secD; preprotein translocase subunit SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM4_65_b1_redo_sep16_scaffold_6584_11
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9929..10330)
DNA (402bp) protein (134aa)
Preprotein translocase subunit YajC Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z705_AZOL4
Preprotein translocase subunit YajC {ECO:0000313|EMBL:CDP53632.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
preprotein translocase subunit YajC
PLM4_65_b1_redo_sep16_scaffold_6584_12
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10633..11523
DNA (891bp) protein (297aa)
Uncharacterized protein Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISM7_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI98463.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM4_65_b1_redo_sep16_scaffold_6584_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11520..12113
DNA (594bp) protein (198aa)
type 11 methyltransferase Tax=Acidovorax sp. MR-S7 RepID=UPI000365E175
SAM-dependent methyltransferases {ECO:0000313|EMBL:GAD22018.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
type 12 methyltransferase
Displaying 13 items

View Taxonomy