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PLM4_65_b1_redo_sep16_scaffold_22391

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_22391_1
unknown

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3..527
DNA (525bp) protein (175aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_22391_2
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(704..1105)
DNA (402bp) protein (134aa)
ArsC family transcriptional regulator Tax=Fodinicurvata sediminis RepID=UPI0003B5B25D
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ACB94316.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
PLM4_65_b1_redo_sep16_scaffold_22391_3
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1159..1668)
DNA (510bp) protein (170aa)
UPF0262 protein TMO_1003 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TJA4_TISMK
hypothetical protein
UPF0262 protein TMO_1003 {ECO:0000256|HAMAP-Rule:MF_00678}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
PLM4_65_b1_redo_sep16_scaffold_22391_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1676..2971)
DNA (1296bp) protein (432aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hisD; histidinol dehydrogenase (HDH) (EC:1.1.1.23)
Histidinol dehydrogenase (HDH) Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EWD3_9PROT
PLM4_65_b1_redo_sep16_scaffold_22391_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2961..3662)
DNA (702bp) protein (234aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ATP phosphoribosyltransferase Tax=Oceanibaculum indicum P24 RepID=K2KLF8_9PROT
hisG; ATP-phosphoribosyltransferase
PLM4_65_b1_redo_sep16_scaffold_22391_6
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3681..4154)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Azospirillum brasilense Sp245 RepID=G8AM40_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KJB96286.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_22391_7
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4151..5416)
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TJA1_TISMK
murA; UDP-N-acetylglucosamine enolpyruvyl transferase
PLM4_65_b1_redo_sep16_scaffold_22391_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5520..5915)
DNA (396bp) protein (132aa)
Thioesterase superfamily protein Tax=Rhodopseudomonas palustris RepID=B3Q8V8_RHOPT
thioesterase superfamily protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_22391_9
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5931..6209)
DNA (279bp) protein (93aa)
XRE family transcriptional regulator Tax=Ralstonia sp. GA3-3 RepID=R7XBI0_9RALS
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:EON16721.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
PLM4_65_b1_redo_sep16_scaffold_22391_10
unknown

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6437..6874
DNA (438bp) protein (146aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_22391_11
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6897..7814)
DNA (918bp) protein (306aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2JTS2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE73784.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_22391_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8031..8420
DNA (390bp) protein (130aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Ribonuclease VapC Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215F0_RHOPB
PilT protein-like protein
PLM4_65_b1_redo_sep16_scaffold_22391_13
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8442..8711)
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA64_PELHB
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Displaying 13 items

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