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PLM4_65_b1_redo_sep16_scaffold_2073

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2073_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..902)
DNA (900bp) protein (300aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase Tax=Microvirga sp. WSM3557 RepID=I4YMB4_9RHIZ
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_2073_2
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(899..1696)
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8U0N8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP62055.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
chorismate mutase
PLM4_65_b1_redo_sep16_scaffold_2073_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1766..3223)
DNA (1458bp) protein (486aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Signal transduction histidine kinase Tax=alpha proteobacterium BAL199 RepID=A8TVV4_9PROT
putative sensor histidine kinase
PLM4_65_b1_redo_sep16_scaffold_2073_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3486..4481
DNA (996bp) protein (332aa)
metA; homoserine O-succinyltransferase (EC:2.3.1.46)
homoserine O-succinyltransferase Tax=Ochrobactrum anthropi RepID=UPI00028864DE
Homoserine O-succinyltransferase {ECO:0000313|EMBL:EXL06194.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
PLM4_65_b1_redo_sep16_scaffold_2073_5
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4412..5158)
DNA (747bp) protein (249aa)
SAM-dependent methyltransferase Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S5L5_PHAFV
SAM-dependent methyltransferase 2 in cluster with Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:KIL98143.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
putative SAM-dependent methyltransferase
PLM4_65_b1_redo_sep16_scaffold_2073_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5244..6017
DNA (774bp) protein (258aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
gloB; glyoxalase II (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase Tax=Oceanibaculum indicum P24 RepID=K2K940_9PROT
PLM4_65_b1_redo_sep16_scaffold_2073_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6079..6852
DNA (774bp) protein (258aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VI21_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU41917.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
PLM4_65_b1_redo_sep16_scaffold_2073_8
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7290..8555)
DNA (1266bp) protein (422aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
Cytosine-specific methyltransferase Tax=Rhodovulum sp. PH10 RepID=J6UG73_9RHOB
DNA-cytosine methyltransferase
PLM4_65_b1_redo_sep16_scaffold_2073_9
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8872..11541
DNA (2670bp) protein (890aa)
aminopeptidase N Tax=Fodinicurvata sediminis RepID=UPI0003B71E49
Membrane alanine aminopeptidase N {ECO:0000313|EMBL:EKV31341.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
pepN; aminopeptidase N
PLM4_65_b1_redo_sep16_scaffold_2073_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11566..12186
DNA (621bp) protein (207aa)
Glutathione S-transferase domain-containing protein Tax=Oceanibaculum indicum P24 RepID=K2JTU8_9PROT
glutathione S-transferase domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_2073_11
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12313..12489
DNA (177bp) protein (59aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TX97_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP63012.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Putative cytosolic protein
PLM4_65_b1_redo_sep16_scaffold_2073_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12524..14140)
DNA (1617bp) protein (539aa)
Putative fatty acid CoA ligase bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. ORS 375 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Long-chain-fatty-acid--CoA ligase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_2073_13
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14441..15004)
DNA (564bp) protein (188aa)
Phasin family protein Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INJ4_RHOCS
phasin family protein
Phasin family protein {ECO:0000313|EMBL:ACI99091.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM4_65_b1_redo_sep16_scaffold_2073_14
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15242..16876)
DNA (1635bp) protein (545aa)
lysK; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase Tax=alpha proteobacterium BAL199 RepID=A8TJH7_9PROT
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM4_65_b1_redo_sep16_scaffold_2073_15
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16998..17906)
DNA (909bp) protein (303aa)
hypothetical protein Tax=Novispirillum itersonii RepID=UPI00036D661C
Aminotransferase {ECO:0000313|EMBL:KJS36849.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
aminotransferase
PLM4_65_b1_redo_sep16_scaffold_2073_16
unknown

Not on your lists

18063..18209
DNA (147bp) protein (49aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2073_17
unknown

Not on your lists

comp(18225..18494)
DNA (270bp) protein (90aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2073_18
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18729..19322
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W3U1_MAGSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAE51484.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
PLM4_65_b1_redo_sep16_scaffold_2073_19
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19446..20642
DNA (1197bp) protein (399aa)
3-carboxy-cis,cis-muconate lactonizing enzyme Tax=Bradyrhizobium sp. YR681 RepID=J3HXM9_9BRAD
3-carboxy-cis,cis-muconate lactonizing enzyme {ECO:0000313|EMBL:EJN08733.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2073_20
Pseudozyma flocculosa, Pseudozyma, Ustilaginales, Ustilaginomycetes, Basidiomycota, Fungi

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20975..21685
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Dactylellina haptotyla (strain CBS 200.50) RepID=S8BB39_DACHA
Uncharacterized protein {ECO:0000313|EMBL:EPQ26064.1}; species="Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; mitosporic Ustilaginaceae; Pseudozyma.;" source="Pseudozyma flocculosa PF-1.;"
PLM4_65_b1_redo_sep16_scaffold_2073_21
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21835..22026)
DNA (192bp) protein (64aa)
Transcriptional regulator, TetR family Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DRD2_THIND
dhaR_[H]; Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGA32149.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
Displaying 21 items

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