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PLM4_65_b1_redo_sep16_scaffold_2149

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2149_1
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..986)
DNA (984bp) protein (328aa)
Acyl-CoA dehydrogenase-like Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q120B8_POLSJ
acyl-CoA dehydrogenase-like
Acyl-CoA dehydrogenase-like {ECO:0000313|EMBL:ABE47124.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
PLM4_65_b1_redo_sep16_scaffold_2149_2
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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1217..3184
DNA (1968bp) protein (656aa)
Pneumococcal surface protein A Tax=Streptococcus pneumoniae RepID=B2IRK1_STRPS
Uncharacterized protein {ECO:0000313|EMBL:EXJ14146.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
glycosyl transferase family 51
PLM4_65_b1_redo_sep16_scaffold_2149_3
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3315..6212
DNA (2898bp) protein (966aa)
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
PLM4_65_b1_redo_sep16_scaffold_2149_4
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6243..8768
DNA (2526bp) protein (842aa)
Putative uncharacterized protein Tax=Thiorhodococcus drewsii AZ1 RepID=G2DWP9_9GAMM
putative membrane protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
PLM4_65_b1_redo_sep16_scaffold_2149_5
unknown

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comp(8723..8944)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2149_6
unknown

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comp(8972..9373)
DNA (402bp) protein (134aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2149_7
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9410..9682)
DNA (273bp) protein (91aa)
RNA polymerase sigma factor Tax=Methylobacterium RepID=B0UCP9_METS4
rpoH2; RNA polymerase factor sigma-32
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
PLM4_65_b1_redo_sep16_scaffold_2149_8
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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10081..10959
DNA (879bp) protein (293aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NKD1_KITSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ32739.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM4_65_b1_redo_sep16_scaffold_2149_9
unknown

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10982..13555
DNA (2574bp) protein (858aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2149_10
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13802..14308
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y269_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG94837.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
PLM4_65_b1_redo_sep16_scaffold_2149_11
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14385..16253
DNA (1869bp) protein (623aa)
adenylate cyclase Tax=Arenimonas oryziterrae RepID=UPI0003B3A486
Uncharacterized protein {ECO:0000313|EMBL:KFN43666.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2149_12
unknown

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16368..17060
DNA (693bp) protein (231aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2149_13
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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17057..17851
DNA (795bp) protein (265aa)
hypothetical protein Tax=Smaragdicoccus niigatensis RepID=UPI00037AE0E2
subtilisin
Subtilisin {ECO:0000313|EMBL:AGL17739.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM4_65_b1_redo_sep16_scaffold_2149_14
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17761..18294)
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HGF7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF83556.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2149_15
unknown

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18835..19083
DNA (249bp) protein (83aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2149_16
unknown

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19153..19401
DNA (249bp) protein (83aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2149_17
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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19553..20257
DNA (705bp) protein (235aa)
Transcriptional regulator, Crp Tax=Thalassospira profundimaris WP0211 RepID=K2LN90_9PROT
Transcriptional regulator, Crp {ECO:0000313|EMBL:EKF10450.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
transcriptional regulator, Crp/Fnr family protein
PLM4_65_b1_redo_sep16_scaffold_2149_18
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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20378..21631
DNA (1254bp) protein (418aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase Tax=Oceanibaculum indicum P24 RepID=K2J3G7_9PROT
Displaying 18 items

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