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PLM4_65_b1_redo_sep16_scaffold_2154

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2154_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..939
DNA (939bp) protein (313aa)
hypothetical protein Tax=Variovorax paradoxus RepID=UPI0003653148
3-carboxymuconate cyclase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_65_b1_redo_sep16_scaffold_2154_2
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(950..1807)
DNA (858bp) protein (286aa)
Taurine dioxygenase Tax=Variovorax paradoxus B4 RepID=T1XBI4_VARPD
taurine catabolism dioxygenase TauD/TfdA
Taurine catabolism dioxygenase TauD/TfdA {ECO:0000313|EMBL:AJE46748.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
PLM4_65_b1_redo_sep16_scaffold_2154_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1804..3333)
DNA (1530bp) protein (510aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036EF63D
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57236.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2154_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3334..3876)
DNA (543bp) protein (181aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI000364A835
Uncharacterized protein {ECO:0000313|EMBL:EJW09285.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2154_5
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3941..4951)
DNA (1011bp) protein (337aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00035EDCBC
Uncharacterized protein {ECO:0000313|EMBL:KFG70975.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2154_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5061..5891
DNA (831bp) protein (277aa)
Xylose isomerase domain-containing protein TIM barrel Tax=Hydrogenophaga sp. PBC RepID=I4MJ85_9BURK
xylose isomerase domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_2154_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5888..7363
DNA (1476bp) protein (492aa)
Uncharacterized protein Tax=Hydrogenophaga sp. PBC RepID=I4MJ86_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_2154_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7360..8391
DNA (1032bp) protein (344aa)
Nucleoside-diphosphate-sugar epimerase Tax=Microvirga sp. WSM3557 RepID=I4YR60_9RHIZ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_2154_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8378..9241
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZ29_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_2154_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9241..9957
DNA (717bp) protein (239aa)
TetR family transcriptional regulator Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPW4_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:EHK57231.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
tetR; transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_2154_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10029..11042)
DNA (1014bp) protein (338aa)
methionine synthase (B12-independent) (EC:2.1.1.14)
Methionine synthase (B12-independent) Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021S0_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_65_b1_redo_sep16_scaffold_2154_12
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11197..12213)
DNA (1017bp) protein (339aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component Tax=Microvirga sp. WSM3557 RepID=I4YR63_9RHIZ
Pyrimidine precursor biosynthesis enzyme
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_65_b1_redo_sep16_scaffold_2154_13
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12399..13166
DNA (768bp) protein (256aa)
nitrate ABC transporter permease Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A0DE4
ABC transporter permease
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_65_b1_redo_sep16_scaffold_2154_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13176..13940
DNA (765bp) protein (255aa)
ABC transporter ATP-binding protein Tax=Rhodopseudomonas sp. B29 RepID=UPI000345342C
ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_65_b1_redo_sep16_scaffold_2154_15
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14022..15092
DNA (1071bp) protein (357aa)
Dihydrodipicolinate synthase Tax=Nitratireductor indicus C115 RepID=K2PHZ3_9RHIZ
dapA; Dihydrodipicolinate synthase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_65_b1_redo_sep16_scaffold_2154_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15465..16295
DNA (831bp) protein (277aa)
ABC transporter permease Tax=Variovorax paradoxus RepID=UPI0003822021
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU38130.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
PLM4_65_b1_redo_sep16_scaffold_2154_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16319..17335
DNA (1017bp) protein (339aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI0002E791B4
NMT1/THI5 like domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_2154_18
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17351..18178
DNA (828bp) protein (276aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Tax=Microvirga sp. WSM3557 RepID=I4YYJ1_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJR63741.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
ABC transporter ATP-binding protein
PLM4_65_b1_redo_sep16_scaffold_2154_19
RLO_PLX_64_10, Bacteria

Not on your lists

18250..19386
DNA (1137bp) protein (379aa)
hypothetical protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B5E821
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_b1_redo_sep16_scaffold_2154_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19530..20681
DNA (1152bp) protein (384aa)
Oxidoreductase protein Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPW5_9RHIZ
Oxidoreductase protein {ECO:0000313|EMBL:EHK57232.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
oxidoreductase
PLM4_65_b1_redo_sep16_scaffold_2154_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20683..21606
DNA (924bp) protein (308aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI0003674368
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57233.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
Displaying 21 items

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