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PLM4_65_b1_redo_sep16_scaffold_2702

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2702_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..445)
DNA (444bp) protein (148aa)
UPI0003CEB114 related cluster Tax=unknown RepID=UPI0003CEB114
Transposase {ECO:0000313|EMBL:CDX60858.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transposase
PLM4_65_b1_redo_sep16_scaffold_2702_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

622..1029
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z2J2_AZOL4
F-box protein SKIP8 {ECO:0000313|EMBL:KJB93212.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2702_3
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1026..1607
DNA (582bp) protein (194aa)
Phosphohistidine phosphatase SixA Tax=Thauera sp. 63 RepID=N6XBF4_9RHOO
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:ENO76730.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
phosphohistidine phosphatase SixA
PLM4_65_b1_redo_sep16_scaffold_2702_4
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1662..2237
DNA (576bp) protein (192aa)
Transcriptional regulator, TetR family protein Tax=Labrenzia aggregata IAM 12614 RepID=A0NPD2_9RHOB
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:EAV45295.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
transcriptional regulator, TetR family
PLM4_65_b1_redo_sep16_scaffold_2702_5
unknown

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2309..3667
DNA (1359bp) protein (453aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2702_6
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3881..5320
DNA (1440bp) protein (480aa)
Putative amidotransferase Tax=Burkholderia sp. YI23 RepID=G8MK58_9BURK
Putative amidotransferase, subunit A {ECO:0000313|EMBL:KHQ54625.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
putative amidotransferase
PLM4_65_b1_redo_sep16_scaffold_2702_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5322..7367)
DNA (2046bp) protein (682aa)
Putative 4Fe-4S ferredoxin, iron-sulfur binding protein Tax=Oceanibaculum indicum P24 RepID=K2JVY6_9PROT
4Fe-4S ferredoxin {ECO:0000313|EMBL:KJB93753.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
4Fe-4S ferredoxin
PLM4_65_b1_redo_sep16_scaffold_2702_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7476..8264
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2K0N3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE76314.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
birA; biotin--[acetyl-CoA-carboxylase] synthetase
PLM4_65_b1_redo_sep16_scaffold_2702_9
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8261..8737
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2JLV9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE76313.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2702_10
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8730..9740
DNA (1011bp) protein (337aa)
Uncharacterized protein Tax=Azospirillum sp. (strain B510) RepID=D3NS86_AZOS1
Uncharacterized protein {ECO:0000313|EMBL:EWY41367.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2702_11
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9777..9983
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3R8_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE15040.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PLM4_65_b1_redo_sep16_scaffold_2702_12
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9990..10520
DNA (531bp) protein (177aa)
Molybdopterin-guanine dinucleotide biosynthesis protein A Tax=Methylobacterium sp. (strain 4-46) RepID=B0UMJ4_METS4
molybdopterin-guanine dinucleotide biosynthesis protein MobA
Molybdopterin-guanine dinucleotide biosynthesis protein A {ECO:0000313|EMBL:ACA17493.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
PLM4_65_b1_redo_sep16_scaffold_2702_13
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10513..11226
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A865_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL96032.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2702_14
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11365..12189
DNA (825bp) protein (275aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI000319D25C
Chaperone {ECO:0000313|EMBL:EJZ31947.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
chaperone
PLM4_65_b1_redo_sep16_scaffold_2702_15
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12261..12461
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TVX5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE10613.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2702_16
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12478..15405
DNA (2928bp) protein (976aa)
Tat pathway signal sequence domain protein Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZX13_9PROT
Formate dehydrogenase {ECO:0000313|EMBL:EWY41372.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
molybdopterin oxidoreductase
PLM4_65_b1_redo_sep16_scaffold_2702_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15421..16044
DNA (624bp) protein (208aa)
4Fe-4S ferredoxin, iron-sulfur binding protein Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIT4_NITHX
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:ABE63863.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PLM4_65_b1_redo_sep16_scaffold_2702_18
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16156..17151
DNA (996bp) protein (332aa)
formate dehydrogenase subunit gamma (EC:1.2.1.2)
Formate dehydrogenase gamma subunit {ECO:0000313|EMBL:ABG63835.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABG63835.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036A5735
PLM4_65_b1_redo_sep16_scaffold_2702_19
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17312..18280
DNA (969bp) protein (323aa)
WD-40 repeat protein Tax=Arthrospira sp. PCC 8005 RepID=H1WH51_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AIB12382.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
WD repeat-containing protein
PLM4_65_b1_redo_sep16_scaffold_2702_20
unknown

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comp(18344..18472)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2702_21
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18562..18951)
DNA (390bp) protein (130aa)
Cytochrome c family protein Tax=Sphingomonas sp. S17 RepID=F3WWF0_9SPHN
Putative cytochrome c {ECO:0000313|EMBL:GAM00628.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2702_22
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18952..19290)
DNA (339bp) protein (113aa)
Hemolysin-type calcium-binding region Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EGS1_CHLL2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKD39036.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
Displaying 22 items

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