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PLM4_65_b1_redo_sep16_scaffold_2733

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2733_1
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..324)
DNA (324bp) protein (108aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase Tax=Rhizobium sp. AP16 RepID=J2CSC5_9RHIZ
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:EJK79964.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
PLM4_65_b1_redo_sep16_scaffold_2733_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(360..1742)
DNA (1383bp) protein (461aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QTC7_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW93423.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
PLM4_65_b1_redo_sep16_scaffold_2733_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1770..2558)
DNA (789bp) protein (263aa)
ABC transporter ATP-binding protein bin=GWC2_Methylomirabilis_70_24 species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_2733_4
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2714..3694
DNA (981bp) protein (327aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component Tax=Bradyrhizobium sp. WSM1253 RepID=I2QNH0_9BRAD
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EIG61326.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
NMT1/THI5-like family protein 5
PLM4_65_b1_redo_sep16_scaffold_2733_5
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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3738..4505
DNA (768bp) protein (256aa)
ABC transporter permease protein bin=GWC2_Chloroflexi_49_37 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
ABC transporter permease
Tax=GWC2_Chloroflexi_49_37_curated
PLM4_65_b1_redo_sep16_scaffold_2733_6
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4509..5513
DNA (1005bp) protein (335aa)
4,5-dihydroxyphthalate decarboxylase {ECO:0000313|EMBL:EEA04627.1}; EC=4.1.1.55 {ECO:0000313|EMBL:EEA04627.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55)
4,5-dihydroxyphthalate decarboxylase Tax=Burkholderia sp. WSM4176 RepID=UPI0003694681
PLM4_65_b1_redo_sep16_scaffold_2733_7
bacterium UASB14, Bacteria

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comp(5572..6987)
DNA (1416bp) protein (472aa)
Uncharacterized protein Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GTJ9_9CYAN
Putative integral membrane protein {ECO:0000313|EMBL:GAK52272.1}; species="Bacteria.;" source="bacterium UASB14.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2733_8
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6984..8276)
DNA (1293bp) protein (431aa)
hypothetical protein Tax=Roseomonas sp. B5 RepID=UPI0003003315
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI50543.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
PLM4_65_b1_redo_sep16_scaffold_2733_9
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8283..9275)
DNA (993bp) protein (331aa)
Prenyltransferase, UbiA Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PHQ9_PSEUV
prenyltransferase, UbiA
Prenyltransferase, UbiA {ECO:0000313|EMBL:AEV36502.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
PLM4_65_b1_redo_sep16_scaffold_2733_10
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9512..11047)
DNA (1536bp) protein (512aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZCX9_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:KJR63157.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
membrane protein
PLM4_65_b1_redo_sep16_scaffold_2733_11
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11080..12927)
DNA (1848bp) protein (616aa)
hypothetical protein Tax=Hyphomicrobium zavarzinii RepID=UPI00037C3D1F
Uncharacterized protein {ECO:0000313|EMBL:KHD12564.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
carbamoyltransferase
PLM4_65_b1_redo_sep16_scaffold_2733_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12971..13123)
DNA (153bp) protein (51aa)
hypothetical protein Tax=Hyphomicrobium zavarzinii RepID=UPI000375DEC3
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_2733_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13180..13614)
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5G4_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL00684.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
PLM4_65_b1_redo_sep16_scaffold_2733_14
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13914..15044
DNA (1131bp) protein (377aa)
Uncharacterized protein Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CD11_DESTA
Uncharacterized protein {ECO:0000313|EMBL:CDO59317.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2733_15
unknown

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comp(15049..16422)
DNA (1374bp) protein (458aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2733_16
unknown

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comp(16431..16994)
DNA (564bp) protein (188aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2733_17
unknown

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comp(16991..18994)
DNA (2004bp) protein (668aa)

This feature has no annotations

Displaying 17 items

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