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PLM4_65_b1_redo_sep16_scaffold_11534

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_11534_1
unknown

Not on your lists

comp(2..169)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_11534_2
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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300..554
DNA (255bp) protein (85aa)
Amidase {ECO:0000313|EMBL:KHD22546.1}; EC=3.5.1.4 {ECO:0000313|EMBL:KHD22546.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
Amidase Tax=alpha proteobacterium BAL199 RepID=A8TX96_9PROT
amidase
PLM4_65_b1_redo_sep16_scaffold_11534_3
Pseudomonas sp. GM50, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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788..2128
DNA (1341bp) protein (447aa)
Outer membrane autotransporter barrel domain-containing protein Tax=Pseudomonas sp. GM50 RepID=J3AS23_9PSED
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:EJM70483.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM50.;"
autotransporter
PLM4_65_b1_redo_sep16_scaffold_11534_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2231..3676
DNA (1446bp) protein (482aa)
Uncharacterized protein Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZXP8_DESOH
conserved protein of unknown function
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_65_b1_redo_sep16_scaffold_11534_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3673..5088
DNA (1416bp) protein (472aa)
hypothetical protein Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037BE98A
conserved protein of unknown function
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_65_b1_redo_sep16_scaffold_11534_6
unknown

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5213..5554
DNA (342bp) protein (114aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_11534_7
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5686..6288
DNA (603bp) protein (201aa)
MarR family transcriptional regulator Tax=Cupriavidus basilensis OR16 RepID=H1S1E9_9BURK
MarR family transcriptional regulator {ECO:0000313|EMBL:EHP43524.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
MarR family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_11534_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6304..7785
DNA (1482bp) protein (494aa)
hypothetical protein Tax=alpha proteobacterium SCGC AAA160-J14 RepID=UPI00035E4056
Uncharacterized protein {ECO:0000313|EMBL:KGH27153.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
4-hydroxyphenylacetate 3-hydroxylase
PLM4_65_b1_redo_sep16_scaffold_11534_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8963..9241
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N8S6_ERYLH
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM4_65_b1_redo_sep16_scaffold_11534_10
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9238..9462
DNA (225bp) protein (75aa)
hypothetical protein Tax=Blastomonas sp. AAP53 RepID=UPI000315DCB0
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
PLM4_65_b1_redo_sep16_scaffold_11534_11
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9565..9765)
DNA (201bp) protein (67aa)
adhA; alcohol dehydrogenase (acceptor) (EC:1.1.99.8)
Alcohol dehydrogenase (Acceptor) Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C5Y0_HYPNA
Alcohol dehydrogenase {ECO:0000313|EMBL:KCZ47041.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
PLM4_65_b1_redo_sep16_scaffold_11534_12
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9800..10975)
DNA (1176bp) protein (392aa)
Major facilitator superfamily MFS_1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GC83_9FIRM
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EEG78818.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
putative MFS-type transporter
PLM4_65_b1_redo_sep16_scaffold_11534_13
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11178..12398
DNA (1221bp) protein (407aa)
Thiolase Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LN0_RHOP5
thiolase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_65_b1_redo_sep16_scaffold_11534_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12534..14393
DNA (1860bp) protein (620aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI000374F4BE
feruloyl-CoA synthase
Tax=CG_Rhodocyc_01
PLM4_65_b1_redo_sep16_scaffold_11534_15
unknown

Not on your lists

comp(14651..14935)
DNA (285bp) protein (95aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_11534_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15139..15534
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XHA6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60741.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_11534_17
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15534..16658
DNA (1125bp) protein (375aa)
Uncharacterized protein Tax=Planctomyces maris DSM 8797 RepID=A6CFI6_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL56504.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
Displaying 17 items

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