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PLM4_65_b1_redo_sep16_scaffold_13323

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_13323_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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3..800
DNA (798bp) protein (266aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Formate--tetrahydrofolate ligase Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J5U1_POLGS
formate-tetrahydrofolate ligase
PLM4_65_b1_redo_sep16_scaffold_13323_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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800..2500
DNA (1701bp) protein (567aa)
Tungsten-containing formate dehydrogenase, beta subunit Tax=Azospirillum brasilense Sp245 RepID=G8B0A8_AZOBR
NADH-quinone oxidoreductase subunit F
NADH-quinone oxidoreductase subunit F {ECO:0000313|EMBL:AIB16537.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM4_65_b1_redo_sep16_scaffold_13323_3
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2553..3776)
DNA (1224bp) protein (408aa)
Beta-ketoacyl synthase family protein Tax=mine drainage metagenome RepID=T1CUA5_9ZZZZ
Beta-ACP synthase {ECO:0000313|EMBL:GAN45757.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
3-oxoacyl-(acyl-carrier-protein) synthase
PLM4_65_b1_redo_sep16_scaffold_13323_4

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comp(3813..4073)
DNA (261bp) protein (87aa)
Phosphopantetheine-binding protein Tax=mine drainage metagenome RepID=T1CA73_9ZZZZ
Phosphopantetheine-binding protein {ECO:0000313|EMBL:EQD62439.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phosphopantetheine-binding protein
PLM4_65_b1_redo_sep16_scaffold_13323_5
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4073..5218)
DNA (1146bp) protein (382aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
UDP-3-O-acylglucosamine N-acyltransferase Tax=Azospirillum sp. (strain B510) RepID=D3NXE2_AZOS1
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
PLM4_65_b1_redo_sep16_scaffold_13323_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5308..6243)
DNA (936bp) protein (312aa)
SupD Tax=Aplysina aerophoba bacterial symbiont clone pAPKS18 RepID=A4U8R4_9BACT
alpha/beta hydrolase fold protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_13323_7
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(6370..7341)
DNA (972bp) protein (324aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035C821B
ortho-chlorophenol reductive dehalogenase
Ortho-chlorophenol reductive dehalogenase {ECO:0000313|EMBL:ACO34110.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
PLM4_65_b1_redo_sep16_scaffold_13323_8
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7446..8213)
DNA (768bp) protein (256aa)
Oxidoreductase, short chain dehydrogenase Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRE3_RHOCS
oxidoreductase, short chain dehydrogenase
Oxidoreductase, short chain dehydrogenase {ECO:0000313|EMBL:ACI98029.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM4_65_b1_redo_sep16_scaffold_13323_9
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8300..8440)
DNA (141bp) protein (47aa)
hypothetical protein Tax=Fodinicurvata sediminis RepID=UPI0003B72821
Wenxma_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ71371.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
chrR1; anti-ECFsigma factor
Displaying 9 items

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