ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_63508

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_63508_1
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..528
DNA (528bp) protein (176aa)
enoyl-CoA hydratase Tax=Pannonibacter phragmitetus RepID=UPI000365F546
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EKE75590.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
enoyl-CoA hydratase/carnithine racemase
PLM4_65_b1_redo_sep16_scaffold_63508_2
R_Deltaproteobacteria_43_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(555..908)
DNA (354bp) protein (118aa)
Putative uncharacterized protein Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB16_AMMDK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
PLM4_65_b1_redo_sep16_scaffold_63508_3
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(905..1105)
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CN82_SYNLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI02167.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
PLM4_65_b1_redo_sep16_scaffold_63508_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1513..1680
DNA (168bp) protein (56aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase Tax=Oceanibaculum indicum P24 RepID=K2IYN4_9PROT
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:EKE75591.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
yccU; O-acetylhomoserine/O-acetylserine sulfhydrylase
PLM4_65_b1_redo_sep16_scaffold_63508_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1682..2998
DNA (1317bp) protein (439aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:KGM31337.1}; EC=2.5.1.49 {ECO:0000313|EMBL:KGM31337.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
O-acetylhomoserine sulfhydrylase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase Tax=Elioraea tepidiphila RepID=UPI00037767C4
PLM4_65_b1_redo_sep16_scaffold_63508_6
unknown

Not on your lists

comp(3023..3325)
DNA (303bp) protein (101aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_63508_7
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3445..3573)
DNA (129bp) protein (43aa)
bleomycin resistance protein (EC:1.13.11.39)
virulence protein Tax=Thiobacillus thioparus RepID=UPI00037D2D54
Wenxma_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ68049.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
PLM4_65_b1_redo_sep16_scaffold_63508_8
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3772..4818)
DNA (1047bp) protein (349aa)
Carbohydrate-selective porin OprB Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IFP2_METNO
carbohydrate-selective porin OprB
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:ACL59602.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
Displaying 8 items

View Taxonomy